gkiar
openly-reproducible-and-accessibly-scalable-science-enthusiast. Ph.D. in Biomedical Engineering, Research Scientist @ChildMindInstitute
Child Mind InstituteMontreal, Quebec
Pinned Repositories
boutiques
A cross-platform descriptive command-line framework for applications
clowdr
Command-line utility for iteratively developing pipelines, deploying them at scale, and sharing data and derivatives
3d-cnn-ae
3D Convolutional Siamese AutoEncoder for learning fMRI parameteric maps
gitmarklet
gitmarklet: Brief summaries of scientific papers I've read indexed via Github Issues
gkiar.github.io
Personal website for Greg Kiar
jhu-bme
EN.580.422: Systems Bioengineering II
2021AggregateMCA
Evaluating various aggregation methods for MCA-perturbed datasets
2021ImpactOfInstability
fuzzy
A fuzzy ecosystem for evaluating the stability of your computational tools.
gkiar's Repositories
gkiar/jhu-bme
EN.580.422: Systems Bioengineering II
gkiar/dataset_variance
Scripts and statistics for processing and normalizing volumes of MRI data
gkiar/aces_figs
figures+flowcharts for aces
gkiar/base_fsl
gkiar/bigbrain-boss
Scripts used to download, tile, and ingest BigBrain into the Boss
gkiar/brain-art
Art made by brains for brains about brains
gkiar/brain-hacking-101
Brain Hacking 101 Course for the 2017 HBM Hackathon in Vancouver, British Columbia
gkiar/coveralls-python
Show coverage stats online via coveralls.io
gkiar/crn2017-teamMTL
Slides and misc info for the Montreal team at the CRN Coding Spring 2017 at Stanford
gkiar/en.580.673
MR in Medicine
gkiar/gremlin
masters thesis work
gkiar/happy-plotter
Become a plotting wizard in R and Python!
gkiar/jupyter-docker
Opinionated stacks of ready-to-run Jupyter applications in Docker.
gkiar/L2L
learn 2 learn
gkiar/LaTeX
templates for LaTeX documents with homebuilt (and friend sourced) macros.
gkiar/learning-ruby
I want to learn Ruby, I think.
gkiar/mindcontrol
MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:
gkiar/MR-devtools
Tools used for processing debugging and assessing quality of MR processing pipelines
gkiar/mri.neurodata.io
mri webpage
gkiar/nddocs
gkiar/ndgrutedb
Pipeline and tools for estimating human connectomes from Diffusion, Structural, and Functional MRI
gkiar/ndintro
slides outlining NeuroData capabilities & functions
gkiar/neuro-pub-graph
Scripts for generating a publication graph using Pubmed as a data source.
gkiar/neurodocker
Generate Docker images with neuroimaging packages
gkiar/NeuroModelling
Models and simulations designed to mimic the nervous system of various organisms
gkiar/openScienceRoom2017
schedule of the open science room at HBM 2017
gkiar/probability_cheatsheet
A comprehensive 10-page probability cheatsheet that covers a semester's worth of introduction to probability.
gkiar/Projects
Scripts for random projects
gkiar/s3-bucket-listing
Create nice directory listings for s3 buckets with javascript and HTML.
gkiar/shiny
Going through shiny tutorials and experimenting