greenelab/RNAseq_titration_results

Add AUC, sensitivity, and specificity metrics

envest opened this issue · 0 comments

We need to add a few more metrics to what we report...

  • AUC
    • add savePredictions = TRUE and classProbs = TRUE to caret::trainControl() in util/train_test_functions.R
    • MLmetrics::AUC() is already in docker image 🤷 we can use that
  • Sens/spec are given in confusion matrix