habi
Working father, generic geek and ex-messenger with a PhD in ultrahigh resolution tomography. I love the outdoors, taking photos and much more.
Institute of Anatomy, Unversity of Bern, SwitzerlandBern, Switzerland
Pinned Repositories
acinar-analysis-manuscript
EAWAG-manuscript
A small manuscript on the preparation and tomographic scanning of a corpus of cichlids from the EAWAG. And a bit on the treatment of the data.
GlobalDiagnostiX
Code and stuff written for my work on http://globaldiagnostix.org/
latex
Some LaTeX code snippets I've hacked together over the years.
latex-test
Results (automatically) in http://habi.github.io/latex-test/main.pdf
Lecture.Microtomography
A lecture on (micro)tomography
OpenSCAD
A collection of OpenSCAD models; stuff to fix private 'issues' and gifts
PhD-Thesis
My PhD-Thesis, copied from the virtual SVN-server I installed at the Institute of Anatomy of the University of Bern in Switzerland and migrated to git.
Zebra-Fish-Gills
Analysis for https://doi.org/10.1371/journal.pone.0228333
zmk-tooth-cohort
Scanning +100 teeth with our sample changer
habi's Repositories
habi/PhD-Thesis
My PhD-Thesis, copied from the virtual SVN-server I installed at the Institute of Anatomy of the University of Bern in Switzerland and migrated to git.
habi/Zebra-Fish-Gills
Analysis for https://doi.org/10.1371/journal.pone.0228333
habi/bitbar-plugins
Plugin repository for BitBar
habi/DaskCourse
Introduction to Dask
habi/defikarte.ch
habi/DSF5
Data Science Fundamentals 5 course at the University of Bern
habi/eli-helper
habi/epaper.js
Node.js library for easily creating an ePaper display on a Raspberry PI using HTML and Javascript.
habi/habi
As per https://blog.frankel.ch/customizing-github-profile/1/
habi/illegal-use-of-OpenStreetMap
Documenting eggregious cases of using OpenStreetMap without required attribution
habi/ipywebrtc
WebRTC for Jupyter notebook/lab
habi/jitsi-meet-electron
Jitsi Meet desktop application powered by :electron:
habi/kartendruck
habi/latex-test-1
habi/Mouselegs.Tuebingen
Analysing scans of instilled mouse legs
habi/offset_docs
Offset Documentation
habi/OpenBikeSensorFirmware
habi/OSMnxNotebooks
habi/pyaare
🦦 A Python wrapper around the aare.guru API
habi/pyproj
Python interface to PROJ (cartographic projections and coordinate transformations library)
habi/random-redirect
Page that redirects to a random page that offers the service you are looking for
habi/ResearchStorage
Consistency check of 80 TB of data...
habi/seaborn
Statistical data visualization using matplotlib
habi/Skeletonization
In this repository you can see the code for skeletonization of binary images using our novel fuzzy inference system.
habi/TIGRE
TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox
habi/TodesfaelleSchweiz
Plot der Todesfälle in der Schweiz mit den Daten des Bundesamts für Statistik
habi/tomobank
Tomography data bank for everyone.
habi/ZstackDepthColorCode
Z-stack Depth Colorcode ImageJ FIJI plugin
habi/Talk.2019.BrukerUserMeeting
My talk at the Bruker micro-CT Users Meeting 2019
habi/unibe-mailing-label
A LaTeX template for a mailing label for Unibe.ch stuff