hammerlab/survivalstan

Issues

• model fit works when running on shell, but runs into error when executing as script

  #87 opened 5 years ago by tyjchen
  0

• how to plot posterior survival with weibull model?

  #86 opened 5 years ago by tyjchen
  0

• conda install not working currently

  #84 opened 6 years ago by michael-ziedalski
  0

• pip install currently not working on ubuntu

  #85 opened 6 years ago by michael-ziedalski
  0

• Dataframe Merge error in utils.plot_pp_survival (Test pem_survival_model with simulated data notebook)

  #76 opened 6 years ago by prabhjot12
  2

• Possible log_t_dur misspecification in Stan model file

  #71 opened 6 years ago by lzachmann
  1

• Bug in example notebook on time-varying effects

  #81 opened 6 years ago by jburos
  1

• UserWarning: Pandas doesn't allow columns to be created via a new attribute name

  #68 opened 6 years ago by jburos
  0

• prep_data_long_surv fails on multi-event data

  #78 opened 6 years ago by jburos
  0

• Change boxplot outlier size

  #80 opened 6 years ago by jburos
  0

• Review code for exposed models; test recovery of simulated data

  #25 opened 8 years ago by jburos
  0

• Test code for stratified model

  #35 opened 8 years ago by jburos
  0

• Additional parameterizations of baseline hazard

  #34 opened 8 years ago by jburos
  0

• Implement semi-competing risks / joint model

  #36 opened 8 years ago by jburos
  1

• Improve patsy interface support

  #52 opened 8 years ago by jburos
  2

• Review & implement survival model diagnostics

  #53 opened 8 years ago by jburos
  0

• add docstring for `surv` syntax

  #62 opened 8 years ago by jburos
  0

• deprecate `fit_stan_survival_model`

  #63 opened 8 years ago by jburos
  0

• Improve performance of `prep_data_long_surv`

  #66 opened 7 years ago by jburos
  0

• implement PEM models for wide-format data

  #67 opened 7 years ago by jburos
  0

• NameError: FIT_FUN

  #75 opened 6 years ago by drezap
  2

• Time and event column types

  #65 opened 6 years ago by adam-haber
  3

• refactor prep_data functions (& formulas.py)

  #74 opened 6 years ago by jburos
  0

• Unknown compilation issue

  #44 opened 6 years ago by tavinathanson
  2

• Compile Error in Windows 10

  #69 opened 7 years ago by csetraynor
  1

• a more user-friendly api for fitting models

  #64 opened 8 years ago by jburos
  0

• implement pp_surv for varying_coef model

  #61 opened 8 years ago by jburos
  0

• Allow pp-data to be passed to prep_pp_survival_data

  #57 opened 8 years ago by jburos
  0

• Clean up docstring formatting

  #59 opened 8 years ago by jburos
  0

• Support multiple groups in `prep_pp_survival_data`

  #49 opened 8 years ago by jburos
  0

• Improve documentation for prep_data_long_surv

  #2 opened 8 years ago by jburos
  2

• documentation for `prep_pp_survival_data`

  #50 opened 8 years ago by jburos
  0

• Feature request: allow user to pass `axis` in to plot_observed_survival

  #56 opened 8 years ago by jburos
  1

• prep-data-long-surv doesn't treat multiple events properly

  #41 opened 8 years ago by jburos
  0

• support competing events in prep-data-long-surv

  #42 opened 8 years ago by jburos
  1

• Support specifying which variables to vary by group in `fit_stan_survival_model`

  #47 opened 8 years ago by e5c
  1

• weibull survival model too sensitive to inits

  #27 opened 8 years ago by jburos
  0

• AttributeError: 'str' object has no attribute 'decode'

  #22 opened 8 years ago by jburos
  0

• improve documentation for make_weibull_survival_model_inits

  #3 opened 9 years ago by jburos
  0

• Unit tests for stan_data input

  #24 opened 8 years ago by jburos
  0

• unit tests for ppchecks

  #21 opened 8 years ago by jburos
  0

• unit tests for trans option to plot_coefs

  #11 opened 8 years ago by jburos
  1

• unit tests for grp-coefs (and varying-coef models in general)

  #18 opened 8 years ago by jburos
  0

• ValueError in _extract_params_from_single_model

  #19 opened 8 years ago by jburos
  0

• Create input parameter for grp-coef type

  #12 opened 8 years ago by jburos
  0

• can't estimate null model

  #8 opened 8 years ago by jburos
  0

• stanity requirement

  #4 opened 8 years ago by tavinathanson
  6