harpur

harpur's Stars

• RILAB/statements

  Successful Job Applications and Grants

  727701130

• popgenmethods/lecture_notes

  Lecture Notes on Computational and Mathematical Population Genetics

  18719015

• ENCODE-DCC/kentUtils

  UCSC command line bioinformatic utilities

  Language:C17345095

• ksamuk/pixy

  Software for painlessly estimating average nucleotide diversity within and between populations

  Language:Python124311614

• signalbash/how_are_we_stranded_here

  Check strandedness of RNA-Seq fastq files

  Language:Python11852025

• chasewnelson/SNPGenie

  Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

  Language:Perl110107637

• timbitz/Whippet.jl

  Lightweight and Fast; RNA-seq quantification at the event-level

  Language:Julia109129421

• vastgroup/vast-tools

  A toolset for profiling alternative splicing events in RNA-Seq data.

  Language:Perl791710429

• StoreyLab/reading

  A collection of papers and books that Storey Lab members should read and others may find useful

  4721013

• tomh1lll/dudeml

  detection of duplications and deletions using Python based machine learning techniques

  Language:Python28134

• halasadi/MAPS

  software for the MAPS method

  Language:C++2425186

• CartwrightLab/SoFoS

  Rescale genetic polymorphism data to match a common sample size.

  Language:C++163114

• shchurch/Insect_Egg_Evolution

  code for manuscripts on insect egg evolution, preprints 2018

  Language:TeX15423

• weissmanlab/magic

  Minimal Assumption Genomic Inference of Coalescence

  Language:Jupyter Notebook14272

• russcd/vcf2MK

  Language:C++6100

• zeeev/zk_tools

  my bioinformatics code

  Language:Perl520

• berrubin/BeeGenomeAligner

  Pipeline for aligning bee genomes

  Language:Python4002

• Yiguan/popoolation2helper

  calculate allele frequency and allele frequency difference using sync data format generated by popoolation2

  Language:C4210

• ajshultz/comp-pop-gen

  Automatic pipeline to go from SRA to vcfs

  Language:Python3103

• cwwhitfield/PooledAfz

  Language:Perl1

• sunnypatel2141/SnIPRE-Input

  Create input file needed to run the SnIPRE program (http://med.stanford.edu/bustamantelab/software.html)

  Language:R1322