hms-dbmi/cistrome-explorer

Issues

• Bigwig or bam files can not be obtained

  #421 opened 4 months ago by tan5251
  1

• Illustration of data conversion in Jupyter Notebooks

  #420 opened a year ago by sehilyi
  0

• track for lineage tree

  #411 opened a year ago by sehilyi
  0

• Allow using combinations of collapsing and filtering on tree

  #419 opened a year ago by sehilyi
  0

• Improve genome interval selection

  #418 opened a year ago by sehilyi
  0

• Check sorting of gene expression

  #417 opened a year ago by sehilyi
  0

• Stream graph instead of stacked bars for performance

  #415 opened a year ago by sehilyi
  0

• Hide genes before typing something in the search box

  #414 opened a year ago by sehilyi
  0

• Add an option to add/remove tracks

  #413 opened a year ago by sehilyi
  0

• Do not consider highlight in redo/undo

  #412 opened a year ago by sehilyi
  0

• Gene Expressions

  #409 opened a year ago by sehilyi
  0

• Helper Python package for processing data

  #410 opened a year ago by sehilyi
  0

• Mouse selection directly on the Heatmap by using a toggle button?

  #408 opened 2 years ago by sehilyi
  0

• GEO site from toolkit table

  #402 opened 2 years ago by sehilyi
  0

• Change default sort to cell type for the last example

  #400 opened 2 years ago by sehilyi
  0

• MIRA data Integration

  #397 opened 2 years ago by sehilyi
  0

• Some minor improvements

  #394 opened 2 years ago by sehilyi
  0

• Show inspector data upon mouse click

  #393 opened 2 years ago by sehilyi
  1

• Misalignment issue between Track API and MultiVec

  #392 opened 2 years ago by sehilyi
  3

• Add links to external data

  #390 opened 3 years ago by sehilyi
  0

• `WEBGL_CONTEXT_LOST` makes heatmap disappear all sudden

  #382 opened 3 years ago by sehilyi
  0

• Prevent becoming `...` button hidden

  #377 opened 3 years ago by sehilyi
  0

• Add variant data as a compact track

  #350 opened 4 years ago by sehilyi
  0

• Use more understandable color for cell and tissue types?

  #351 opened 4 years ago by sehilyi
  0

• Add examples for single-cell TAC-seq data?

  #349 opened 4 years ago by sehilyi
  0

• Consider using synonym in searching categorical data

  #348 opened 4 years ago by sehilyi
  0

• Allow adjusting the width/height of heatmap

  #343 opened 4 years ago by sehilyi
  0

• Fuzzy search for categorical data

  #347 opened 4 years ago by sehilyi
  0

• Remove `highlight` options or change it to `select`?

  #339 opened 4 years ago by sehilyi
  0

• Cistrome table sorting does not work on Chrome

  #340 opened 4 years ago by sehilyi
  0

• Uploading a same bed file as the previous one does not open dialog

  #341 opened 4 years ago by sehilyi
  0

• Support dynamically aggregating samples by clusters that are externally loaded?

  #342 opened 4 years ago by sehilyi
  0

• Allow aggregating row with any nominal values

  #338 opened 4 years ago by sehilyi
  0

• Upload csv format metadata and allow to select them to visualize

  #337 opened 4 years ago by sehilyi
  0

• Support loading bed files

  #326 opened 4 years ago by sehilyi
  1

• Opening the same bed file doesn't work

  #336 opened 4 years ago by sehilyi
  0

• Support loading a bigwig file from toolkit results

  #333 opened 4 years ago by sehilyi
  0

• Add a SVG/PNG export button

  #324 opened 4 years ago by sehilyi
  0

• Clicking on Remove All Filter makes error in other demos

  #310 opened 4 years ago by sehilyi
  0

• Aggregate rows by cell/tissue types

  #320 opened 4 years ago by sehilyi
  0

• Use `horizontal-stacked-bar` for adding a selected row

  #322 opened 4 years ago by sehilyi
  1

• Allow searching a 'gene' in the header of CistromeExplorer

  #323 opened 4 years ago by sehilyi
  1

• Filtering all rows crashes the app

  #318 opened 4 years ago by sehilyi
  1

• Aggregate rows by categories

  #319 opened 4 years ago by sehilyi
  1

• Refinement of the toolkit query results and/or add a single track w/ `plus` button

  #313 opened 4 years ago by sehilyi
  1

• Superposed line charts for aggregated rows

  #311 opened 4 years ago by sehilyi
  0

• Add a heatmap/matrix plot for selecting CistromeDB samples for visualization?

  #306 opened 4 years ago by keller-mark
  1

• Update style of "nominal-dynamic" bar to match style of "nominal" bar

  #303 opened 4 years ago by keller-mark
  0

• Use our server for storing demo tilesets

  #300 opened 4 years ago by sehilyi
  0

• Allow registering plugin tracks for HiGlassMeta component externally

  #298 opened 4 years ago by keller-mark
  0