Pinned Repositories
anyhtmlwidget
Bringing core concepts from anywidget to R
awesome-biological-visualizations
A list of web-based interactive biological data visualizations.
dynamic-importmap
Rewrite bare import specifiers at runtime in the browser
pizzarr
Slice into Zarr arrays in R 🍕
snippets
Things that I find myself googling repeatedly
tfjs-umap
use-coordination
Implement coordinated multiple views in React-based visualization systems.
vueplotlib
Declarative, interactive, linked 📊📈 components
explosig
ExploSig: web-based interactive visualization of mutation signatures and somatic mutation data
vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
keller-mark's Repositories
keller-mark/awesome-biological-visualizations
A list of web-based interactive biological data visualizations.
keller-mark/pizzarr
Slice into Zarr arrays in R 🍕
keller-mark/anyhtmlwidget
Bringing core concepts from anywidget to R
keller-mark/snippets
Things that I find myself googling repeatedly
keller-mark/use-coordination
Implement coordinated multiple views in React-based visualization systems.
keller-mark/esbuild-py
Python bindings to the esbuild Transform API
keller-mark/harvard-gsas-thesis
A LaTeX class for publising a PhD thesis according to Harvard GSAS requirements
keller-mark/miqc-py
Python implementation of miQC: probablistic quality control of scRNA-seq data
keller-mark/qdpx-to-json
Convert REFI-QDA .qdpx file into JSON and PNG files
keller-mark/anndataR
AnnData interoperability in R
keller-mark/anywidget
custom jupyter widgets made easy
keller-mark/assemblique
keller-mark/cistrome-explorer-higlass-server
Backup of https://github.com/hms-dbmi/cistrome-explorer-higlass-server
keller-mark/compasce
Data processing to support visual comparisons of single-cell data
keller-mark/content
The content behind MDN Web Docs
keller-mark/crul
R6 based http client for R (for developers)
keller-mark/generate-tiff-offsets
Generate tiff offsets for optimized remote viewing
keller-mark/markk.co
Personal website
keller-mark/pyLemur
A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.
keller-mark/pyodide
Pyodide is a Python distribution for the browser and Node.js based on WebAssembly
keller-mark/scanpy
Single-cell analysis in Python. Scales to >1M cells.
keller-mark/sennet-portal-ui
keller-mark/simple-features-wkb-js
Simple Features WKB Javascript
keller-mark/Spatial-Query
Spatial query for spatial transcriptomics data
keller-mark/spatialdata-uv-install-test
keller-mark/spatialdata-vis-interop
keller-mark/use-duckdb
Utilities for using DuckDB in react
keller-mark/user-templates-api
keller-mark/with-html
(Ab)use python context managers to construct HTML
keller-mark/zarrita.js
A JavaScript toolkit for working with chunked, compressed, n-dimensional arrays