Pinned Repositories
genenotebook
A collaborative notebook for genes and genomes
react-bio-viz
React components for biological data visualization
asteroid
An alternative client for a Meteor backend
deep_learning
gff_toolkit
tools for handling gff files
IOGA
Iterative Organellar Genome Assembly
parasponia_code
picea
lightweight python library for working with trees and sequence collections
taxus
Gaussian Process models for transcriptome data
holmrenser's Repositories
holmrenser/IOGA
Iterative Organellar Genome Assembly
holmrenser/picea
lightweight python library for working with trees and sequence collections
holmrenser/parasponia_code
holmrenser/deep_learning
holmrenser/taxus
Gaussian Process models for transcriptome data
holmrenser/AoC2018
Advent of Code 2018
holmrenser/AoC2019
Advent of Code 2019 solutions
holmrenser/AoC2020
Advent of Code 2020
holmrenser/art_gen
holmrenser/biosb_metagenomics_notebooks
jupyter notebooks for biosb metagenomics course
holmrenser/blastserver
holmrenser/commander.js
node.js command-line interfaces made easy
holmrenser/distrax
holmrenser/documentation
:book: documentation for modern JavaScript
holmrenser/esdoc2-plugins
holmrenser/genenotebook
A collaborative notebook for genes and genomes
holmrenser/genometools
GenomeTools genome analysis system.
holmrenser/GPcounts
holmrenser/GPJax
A didactic Gaussian process package for researchers in Jax.
holmrenser/gpytorch
A highly efficient and modular implementation of Gaussian Processes in PyTorch
holmrenser/jupyterhub_conda_docker
holmrenser/lzw_kernel
holmrenser/MCScanX
MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
holmrenser/nitrate_cytokinin_nodulation
holmrenser/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
holmrenser/pantools
PanTools
holmrenser/pyro
Deep universal probabilistic programming with Python and PyTorch
holmrenser/readline-promise-repro
holmrenser/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
holmrenser/transcriptional_networks_nodulation
Code and supplementary data for transcriptional networks thesis chapter