igvteam/igv.js

Aliases not iterable

KloostermanJoukje opened this issue · 3 comments

KloostermanJoukje commented

Hello all,

I am currently using the embedded genome browser.
I have cloned the code from github, and build it, i have integrated this in a different pipeline.

However it was working normally when I used the relase 2.15.11, but now working with the unreleased code I get the following error when loading a track with the cram format:

image

I am using this unreleased version of igv because there are some features that i want to implement and test.
I hope you can help me, and maybe you can tell me how to fix it.

Below is a screenshot on how i load the track:

image

KloostermanJoukje commented

I have a similar issue when opening the cram_vcf.html in the directory examples from igv.js

image

I have also downloaded the 2.15.11 source code, and went to the same file, it works perfectly fine there. Opening it and reviewing it in the browser shows the tracks.

KloostermanJoukje commented

Maybe good to know that i am also loading a VCF file in the tracks, maybe that causes the issue?

jrobinso commented

Looks like a bug, I will look into it.

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