Pinned Repositories
SCENIC
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Deep_learning
Shiny_apps
harmony
Fast, sensitive and accurate integration of single-cell data with Harmony
scGNN
scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks
GseaVis
An implement R package to visualize GSEA results
MAGIC
MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.
CellOracle
This is the alpha version of the CellOracle package
hdWGCNA
High dimensional weighted gene co-expression network analysis
SAW