inab/trimal

BLOSUM45 error

Opened this issue · 0 comments

Hi there,
I just ran into an error that I believe is caused by the BLOSUM45 matrix (it seems that the wild character is needed but not taken by trimal) . Both commands below produce a Segmentation error

trimal -in PTHR26451_2456.ali -out PTHR26451_2456.phy -gt 0.9 -cons 60 -st 0.3 -matrix BLOSUM45b
trimal -in PTHR26451_2456.ali -out PTHR26451_2456.phy -gt 0.9 -cons 60

Please find attached the files that cause the error for your consideration.
Many thanks,
DE

Data.zip