jaspershen

jaspershen's Stars

• Rdatatable/data.table

  R's data.table package extends data.frame:

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• briatte/awesome-network-analysis

  A curated list of awesome network analysis resources.

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• tidyverse/tidyverse

  Easily install and load packages from the tidyverse

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• YuLab-SMU/clusterProfiler

  :bar_chart: A universal enrichment tool for interpreting omics data

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• tidyverse/reprex

  Render bits of R code for sharing, e.g., on GitHub or StackOverflow.

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• RConsortium/S7

  S7: a new OO system for R

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• jtlandis/ggside

  ggplot2 extension allowing for plotting various geometries as side panels using the ggplot2 API

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• ggplot2-exts/gallery

  Gallery of ggplot2 extensions

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• zdk123/SpiecEasi

  Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

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• r-lib/withr

  Methods For Temporarily Modifying Global State

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• tidymodels/butcher

  Reduce the size of model objects saved to disk

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• thomasp85/transformr

  Smooth Polygon Transformations

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• broadinstitute/depmap_omics

  What you need to process the Quarterly DepMap-Omics releases from Terra

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• lgatto/RforProteomics

  Using R and Bioconductor packages for the analysis and comprehension of proteomics data.

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• Bioconductor/BiocParallel

  Bioconductor facilities for parallel evaluation

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• Proteomicslab57357/UniprotR

  Retrieving Information of Proteins from Uniprot

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• frankkramer-lab/mully

  R package to create, modify and visualize graphs with multiple layers.

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• LiChenPU/NetID

  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery

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• xia-lab/MetaboAnalyst_Docker

  Docker for MetaboAnalyst 4.0

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• rformassspectrometry/MetaboAnnotation

  High level functionality to support and simplify metabolomics data annotation.

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• yufree/xcmsrocker

  Rocker image for metabolomics data analysis

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• ZhuMetLab/MetDNA2

  Knowledge-guided multilayer network approach is executed in MetDNA2

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• wilsontom/msconverteR

  Create .mzML files through the R Console

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• bulksoil/tidyMB

  A Set of Tools and Wrappers for Tidy Microbiome Analysis in R

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• lehallib/DEswan

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• b2slab/mWISE

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• rformassspectrometry/MsExperiment

  Managing and Processing Mass Spectrometry Experiments

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• GauravPandeyLab/MetaClean

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• yufree/enet

  network analysis for exposure study

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• ZhuMetLab/Sterol4DAnalyzer

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