jelman

jelman's Stars

• CBICA/NiChart_Project

  Neuro Imaging Chart of AI-based Imaging Biomarkers

  Language:Python123

• CompImg/LST-AI

  LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation

  Language:Python184

• richardajdear/AHBA_gradients

  Exploring intrinsic gradients of the AHBA

  Language:Jupyter Notebook82

• milanwiedemann/lcsm

  An R package for latent change score modelling (LCSM)

  Language:R173

• AthenaEPI/dmipy

  The open source toolbox for reproducible diffusion MRI-based microstructure estimation

  Language:Python9631

• BergmannLab/PascalX

  Language:Python164

• sidchop/RepoNeuroVis

  Reproducible and Programmatic Human Neuroimaging Visualisations

  Language:Jupyter Notebook737

• opain/TWAS-GSEA

  R script that performs gene-set or gene property analysis using TWAS results.

  Language:R306

• adirangan/lakcluster_c

  Language:C41

• qlu-lab/PUMAS

  Fine-tuning polygenic risk score models using GWAS summary statistics

  Language:R3611

• erikgahner/awesome-ggplot2

  A curated list of awesome ggplot2 tutorials, packages etc.

  1.6k167

• larslau/progmod

  Disease progression modeling based on nonlinear mixed effects models

  Language:R254

• philips-software/latrend

  An R package for clustering longitudinal datasets in a standardized way, providing interfaces to various R packages for longitudinal clustering, and facilitating the rapid implementation and evaluation of new methods

  Language:R285

• rmcelreath/stat_rethinking_2022

  Statistical Rethinking course winter 2022

  Language:R4.1k446

• MICA-MNI/BrainStat

  A statistics and context decoding toolbox for neuroimaging.

  Language:Jupyter Notebook9422

• kenjihiranabe/The-Art-of-Linear-Algebra

  Graphic notes on Gilbert Strang's "Linear Algebra for Everyone"

  Language:PostScript17.9k2.2k

• molgenis/systemsgenetics

  Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

  Language:Java171100

• jorvlan/raincloudplots

  {package} The easy way to create raincloud plots

  Language:R15917

• netneurolab/neuromaps

  A toolbox for comparing brain maps

  Language:Python24055

• andymckenzie/BRETIGEA

  Brain Cell Type Specific Gene Expression Analysis

  Language:R142

• robloughnan/pyTWAS

  Small library to perform individual level imputation of TWAS genes from plink files

  Language:Python1

• MASILab/PreQual

  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images

  Language:Python438

• dfsp-spirit/fsbrain

  R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

  Language:R6413

• kwagstyl/matplotlib_surface_plotting

  matplotlib mesh surface plotter

  Language:Python272

• rougier/scientific-visualization-book

  An open access book on scientific visualization using python and matplotlib

  Language:Python10.7k986

• murraylab/brainsmash

  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity

  Language:Python4111

• ThomasYeoLab/CBIG

  Language:MATLAB588385

• MattCowgill/ggannotate

  Interactively annotate ggplots

  Language:R30920

• andywdahl/rgwas

  Learn and validate subtypes from multiple traits

  Language:R203

• rmarkello/abagen

  A toolbox for working with Allen Human Brain Atlas microarray expression data

  Language:Python9341