jfy133

jfy133's Stars

• sharu725/online-cv

  A minimal Jekyll Theme to host your resume (CV) on GitHub with a few clicks.

  Language:JavaScript3.2k30596k

• manuelernestog/weektodo

  WeekToDo is a Free and Open Source Minimalist Weekly Planner and To Do list App focused on privacy. Available for Windows, Mac, Linux or online.

  Language:Vue1.6k18239178

• MultiQC/MultiQC

  Aggregate results from bioinformatics analyses across many samples into a single report.

  Language:JavaScript1.2k351.7k606

• Cimbali/pympress

  Pympress is a simple yet powerful PDF reader designed for dual-screen presentations

  Language:Python1.2k1923689

• romannurik/SlidesCodeHighlighter

  A little web app that helps you copy+paste syntax-highlighted code into slide decks.

  Language:TypeScript1.1k93396

• YuLab-SMU/ggtree

  :christmas_tree:Visualization and annotation of phylogenetic trees

  Language:R85038506173

• giocomai/ganttrify

  Create beautiful Gantt charts with ggplot2

  Language:R667115165

• coolbutuseless/dplyr-cli

  Manipulate CSV files on the command line using dplyr

  Language:R27081520

• grst/rstudio-server-conda

  Run Rstudio Server in a conda environment

  Language:Shell23862750

• PacificBiosciences/pb-metagenomics-tools

  Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics

  Language:HTML181136635

• askimed/nf-test

  Simple test framework for Nextflow pipelines

  Language:Java147718326

• pirovc/genome_updater

  Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy

  Language:Shell14614315

• nf-core/taxprofiler

  Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

  Language:Nextflow13215620637

• nf-core/test-datasets

  Test data to be used for automated testing with the nf-core pipelines

  10914754361

• fulcrumgenomics/fqgrep

  Grep for FASTQ files

  Language:Rust9411144

• SPAAM-community/AncientMetagenomeDir

  Repository containing lists of all published ancient metagenomic (and related) samples and libraries

  Language:HTML681348633

• AugustDev/nf-shard

  Nextflow runs monitoring and organisation UI

  Language:TypeScript55449

• ktmeaton/NCBImeta

  Efficient and comprehensive metadata acquisition from the NCBI databases (includes SRA).

  Language:Python483148

• GenomicsStandardsConsortium/mixs

  Minimum Information about any (X) Sequence” (MIxS) specification

  Language:Python412073621

• MayaGans/shinyBody

  An SVG clickable body that can be colored using data and returns the clicked on body part

  Language:R40646

• nevrome/ggpointgrid

  R Package - Rearrange scatter plot points on a regular grid

  Language:R38430

• taxprofiler/taxpasta

  TAXnomic Profile Aggregation and STAndardisation

  Language:Python344667

• NBISweden/aMeta

  Ancient microbiome snakemake workflow

  Language:Python2198414

• ubinfie/ubinfie.github.io

  µbinfie blog

  Language:HTML161166

• georgiesamaha/configBuilder-nf

  Nextflow config builder scripts for supported HPC infrastructures.

  Language:Python72291

• nextflow-io/vscode-dag-preview

  Experimental VSCode plugin rendering Nextflow execution DAG

  Language:TypeScript5401

• bbartholdy/keepitsecret

  Lord of the Rings Password Generator

  Language:R3110

• jfy133/cuperdec

  R library to generate 'Cumulative Percent Decay' curves for microbial taxonomic profiles

  Language:R32130

• sidora-tools/pandora2eager

  Gather information from pandora and format it for use with nf-core/eager

  Language:R3371

• ISBArch/ISBArch.github.io

  Website for the International Society for Biomolecular Archaeology

  Language:SCSS11