jianhuupenn/ItClust
Iterative transfer learning with neural network improves clustering and cell type classification in single-cell RNA-seq analysis
Jupyter Notebook
Issues
- 1
- 6
Figure 5C in the paper
#15 opened by mvis1231 - 8
NameError: name 'read_10X' is not defined
#13 opened by Ci-TJ - 7
- 5
KeyError: 'X_umap'
#9 opened by bitcometz - 11
DE analysis
#11 opened by mvis1231 - 10
- 4
Suggestions on train data construction
#10 opened by bitcometz - 4
- 1
Cannot not show t-SNE pictures
#8 opened by bitcometz - 4
- 18
Issue with usage
#5 opened by mohit1997 - 3
- 4
QUESTION: How to predict on `anndata` object?
#3 opened by cartal - 4