josiahseaman/skittle
DNASkittle is a web based genome browser that provides an interactive visualization of the raw sequence. Every nucleotide of 10Kbp can fit on one screen at a time. It makes heavy use of signal processing techniques to extract tandem repeats, and other genome elements.
PythonGPL-2.0
Issues
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Send Feedback form
#226 opened by josiahseaman - 0
Create new User account on dnaskittle.com
#168 opened by josiahseaman - 0
Add Undo and Redo buttons, keyboard shortcuts
#170 opened by josiahseaman - 0
Interface tool for adding an annotation note
#172 opened by josiahseaman - 0
Comments on annotations
#173 opened by josiahseaman - 0
User up/down voting on each note
#176 opened by josiahseaman - 1
Annotation Display behavior at large width/scale
#188 opened by josiahseaman - 1
Chromosome Position indicator
#189 opened by josiahseaman - 0
Adjust width with the Repeat Map indicator
#212 opened by marshallds - 0
Upload chromosome from URL
#213 opened by marshallds - 1
10k bp Research
#215 opened by josiahseaman - 1
Basic Zoomable Image Tiles Implementation
#221 opened by BryanHurst - 2
Repeat Map Detail PNG
#214 opened by josiahseaman - 1
Displaying 1000+ base repeats
#211 opened by marshallds - 0
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3-mer enhancement
#210 opened by marshallds - 0
Performance issues at high scales
#209 opened by marshallds - 0
Divide by Zero in precompute
#207 opened by josiahseaman - 0
Unexpected characters in the file: 'Y' not in ACGTN
#206 opened by josiahseaman - 0
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Resize tool on all Graph borders
#198 opened by josiahseaman - 1
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Duplicated chunks in Repeat Overview
#184 opened by josiahseaman - 0
URL auto-update clobbers highglighter settings
#203 opened by josiahseaman - 0
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Changing scale does not change width
#196 opened by josiahseaman - 0
Hyperlink the Gene Name field
#201 opened by josiahseaman - 0
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Round down chunk number based on scale
#197 opened by josiahseaman - 0
Weighted Color Averaging for Nucleotide Display
#194 opened by josiahseaman - 1
Old Repeat Map offered as a separate graph
#192 opened by josiahseaman - 0
Random start position button
#190 opened by josiahseaman - 0
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Populate dnaskittle.com DB with SNP indexes
#186 opened by josiahseaman - 0
Populate DB with SNP indexes
#185 opened by josiahseaman - 0
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Low Pass filter for Threemer Detector
#182 opened by josiahseaman - 1
Oligomer Usage normalization needs to be static
#179 opened by josiahseaman - 1
Repeat Overview is broke
#181 opened by marshallds - 0
Peno Curve layout for raster graphs
#180 opened by josiahseaman - 0
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'Popular' default for serving Public annotations
#177 opened by josiahseaman - 0
Control which 'Circle' to post a note to
#175 opened by josiahseaman - 0
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Protocol for the client to add an annotation note for storage on the server
#171 opened by josiahseaman - 0
Store Undo stack based on "link here" URLs.
#169 opened by josiahseaman