k-florek

Bioinformatician, public health, microbial genomics, antimicrobial resistance

Wisconsin State Laboratory of HygieneMadison WI

Pinned Repositories

amd-hackathon-2020
Language:CSS0 2 00
binfo_scripts
Collections of miscellaneous scripts
Language:Python0 2 01
Donut_Falls
Basic workflow for nanopore sequencing data
Language:Nextflow0 0 00
k-florek.github.io
Language:HTML0 2 00
love-signal
Code for transmitting colors to other particle photon devices
Language:C++0 2 00
workshop
Language:Groovy1 1 01
docker-builds
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
Language:Dockerfile181 12 352116
staphb_toolkit
Python Toolkit for using containerized programs in either Singularity or Docker
Language:Python25 11 3918
dryad
Dryad is a pipeline to construct reference free core-genome or SNP phylogenetic trees for examining prokaryote relatedness in outbreaks.
Language:Nextflow17 3 15
sc2-data-dashboard
Language:R5 2 00

k-florek's Repositories

k-florek/workshop
Language:Groovy1 1 01
k-florek/amd-hackathon-2020
Language:CSS0 2 00
k-florek/binfo_scripts
Collections of miscellaneous scripts
Language:Python0 2 01
k-florek/Donut_Falls
Basic workflow for nanopore sequencing data
Language:Nextflow0 0 00
k-florek/k-florek.github.io
Language:HTML0 2 00
k-florek/love-signal
Code for transmitting colors to other particle photon devices
Language:C++0 2 00
k-florek/QuickSNP
QuickSNP builds a NJ tree from a SNP distance matrix.
Language:Python0 1 00
k-florek/U6143_ssd1306
Language:C