StaPH-B/docker-builds

Issues

• [Request An Update]: raxml

  #953 opened 23 days ago by erinyoung
  0

• [Container Request]: PacBio Secondary Analysis Tools

  #926 opened 3 months ago by Kincekara
  0

• [Request An Update]: AMRFinder

  #972 opened 2 months ago by erinyoung
  0

• [Container Request]: viridian

  #971 opened 2 months ago by erinyoung
  1

• [Container Request]: add bwa 0.7.18

  #967 opened 2 months ago by kapsakcj
  0

• [Request An Update]: pyMLST

  #941 opened 3 months ago by Kincekara
  0

• [Container Request]: assembly_snptyper

  #939 opened 3 months ago by erinyoung
  0

• [Container Request]: clair3

  #933 opened 3 months ago by kapsakcj
  0

• [Request An Update]: skesa

  #748 opened 4 months ago by erinyoung
  5

• [Request An Update]: Gambit

  #905 opened 4 months ago by erinyoung
  0

• Error fetching image[Bug]:

  #891 opened 4 months ago by YIGUIz
  0

• snpeff executable file not found in $PATH

  #889 opened 4 months ago by ybdong919
  10

• [Container Request]: Verkko

  #820 opened 4 months ago by ChiaraCampanelli
  1

• [Container Request]: Gubbins

  #885 opened 4 months ago by Kincekara
  0

• [Container Request]: pyCircos

  #743 opened 5 months ago by erinyoung
  0

• [Container Request]: pyMSAviz

  #745 opened 5 months ago by erinyoung
  0

• [Container Request]: adjust_vcf

  #757 opened 5 months ago by erinyoung
  0

• [Container Request]: circos

  #869 opened 5 months ago by Kincekara
  0

• [Container Request]: diamond

  #858 opened 5 months ago by Kincekara
  0

• [Request An Update]: phytreeviz-0.2.0

  #863 opened 5 months ago by DrB-S
  3

• [Container Request]: BUSCO lite with bacteria_odb

  #848 opened 5 months ago by Kincekara
  0

• Dockerhub link in readme goes to dockerhub page for artic-ncov2019 instead of artic

  #852 opened 5 months ago by garfinjm
  3

• [Container Request]: Kleborate 2.4.0

  #823 opened 5 months ago by erinyoung
  0

• [Request An Update]: BUSCO

  #845 opened 6 months ago by Kincekara
  3

• [Repo Request]: New Templates

  #750 opened 10 months ago by erinyoung
  3

• [Request An Update]: The bcftools container missing the plugins

  #755 opened 6 months ago by adhroso
  5

• [Container Request]: genomad

  #759 opened 6 months ago by erinyoung
  1

• [Container Request]: PPanGGOLiN

  #754 opened 6 months ago by erinyoung
  0

• [Request An Update]: Add VADR 1.6.3 but wait for Flu model file availability

  #795 opened 6 months ago by kapsakcj
  4

• [Request An Update]: blast 2.15

  #779 opened 6 months ago by erinyoung
  0

• [Container Request]: el_gato

  #781 opened 7 months ago by Kincekara
  1

• [Request An Update]: cite containers that use RGDv2

  #824 opened 7 months ago by kapsakcj
  0

• [Request An Update]: sratoolkit 3.0.7

  #813 opened 7 months ago by Kincekara
  0

• [Bug]: Set snakemake cache directory for pangolin

  #802 opened 7 months ago by erinyoung
  3

• [Container Request]: ANIclustermap

  #746 opened 7 months ago by erinyoung
  0

• [Request An Update]: ncbi-amrfinderplus to v3.11.26

  #810 opened 7 months ago by Kincekara
  2

• [Bug]: QUAST for phased diploid assembly doesn't work

  #805 opened 7 months ago by ChiaraCampanelli
  11

• [Container Request]: Dorado

  #807 opened 7 months ago by erinyoung
  0

• [Container Request]: phyTreeViz

  #753 opened 7 months ago by erinyoung
  0

• [Bug]: SnpEff container - curl not found

  #760 opened 7 months ago by Saarkie
  4

• [Container Request]: DrPRG

  #762 opened 7 months ago by erinyoung
  0

• [Bug]: Container not on docker/quay

  #797 opened 8 months ago by arianna-smith
  2

• [Container Request]: Pavian

  #764 opened 8 months ago by Kincekara
  0

• [Container Request]: CheckM

  #766 opened 8 months ago by Kincekara
  0

• [Container Request]: Bracken

  #763 opened 8 months ago by Kincekara
  0

• [Request An Update]: skani v0.2.1

  #765 opened 8 months ago by Kincekara
  0

• [Request An Update]: nanoplot

  #751 opened 8 months ago by MrTomRod
  2

• [Bug]: samtools v 1.18 plot-ampliconstats not working

  #756 opened 9 months ago by erinyoung
  2

• [Container Request]: skani

  #747 opened 9 months ago by erinyoung
  0

• [Container Request]: USHER

  #749 opened 10 months ago by erinyoung
  0