karthickbrlab

Pinned Repositories

• singularity

  Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.

  Language:Go2.5k883.3k425

• diamond

  Accelerated BLAST compatible local sequence aligner.

  Language:C++1.1k38701182

• EVidenceModeler

  source code for EVM

  Language:Perl10349720

• BRAKER

  BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

  Language:Perl3672381581

• GetOrganelle

  Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)

  Language:Python2801125254

• AGAT

  Another Gtf/Gff Analysis Toolkit

  Language:Perl4664533956

• PASApipeline

  PASA software

  Language:Perl1751330857

• wgdi

  WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes

  Language:Python12435022

• singularity

  SingularityCE is the Community Edition of Singularity, an open source container platform designed to be simple, fast, and secure.

  Language:Go7771978398

• jcvi

  Python library to facilitate genome assembly, annotation, and comparative genomics

  Language:Python76136484186

karthickbrlab's Repositories