Pinned Repositories
annot_gnomad
Annotate structural variants in gnomAD
annot_utils
scripts processing annotation data from UCSC
annovar2vcf
under development
Genomon-ITDetector
for detecting internal tandem duplication from genome sequence data.
GenomonBreakPoint
empirical bayesian framework for detecting somatic breakpoints from sequencing data
module_box_kchiba
RefGeneTxtToBed
Convert UCSC refGene.txt to bed format
RNAseq_for_HGC
SvABAvsGenomonSV
The comparison of SvABA and GenomonSV
three-arrowed-vcf-validator
Python tools for validating vcf file
ken0-1n's Repositories
ken0-1n/Genomon-ITDetector
for detecting internal tandem duplication from genome sequence data.
ken0-1n/module_box_kchiba
ken0-1n/RefGeneTxtToBed
Convert UCSC refGene.txt to bed format
ken0-1n/SvABAvsGenomonSV
The comparison of SvABA and GenomonSV
ken0-1n/three-arrowed-vcf-validator
Python tools for validating vcf file
ken0-1n/annot_gnomad
Annotate structural variants in gnomAD
ken0-1n/BateiraSV
ken0-1n/CWL-DNA-Alignment
ken0-1n/EBFilter
empirical bayesian mutation filtering
ken0-1n/GCATWorkflowCloud
ken0-1n/gdcdl-workflow
ken0-1n/genomon_Rscripts
ken0-1n/GenomonExpression
python script for calculating expression values from RNA-seq
ken0-1n/GenomonFisher
Genomon fisher exact test mutation caller
ken0-1n/GenomonHotspotCall
identify hotspot mutations
ken0-1n/GenomonMutationFilter
ken0-1n/GenomonSV
structure detection program
ken0-1n/incubator-specification
Ideas on VCF specification
ken0-1n/module_box
ken0-1n/mutation_util
check GenomonPipeline result file
ken0-1n/nanopolish
Signal-level algorithms for MinION data
ken0-1n/ob_utils
ken0-1n/onebreak
national cancer center break point
ken0-1n/sv-post-process
ken0-1n/sv_merge
Merge SV results detected by multiple tools
ken0-1n/sv_panel
ken0-1n/sv_utils
package for analyzing GenomonSV results
ken0-1n/test_repo
ken0-1n/TraficLiftoverGRCh37toGRCh38
Lift over the Trafic result file from GRch37 to GRCh38.
ken0-1n/vcf-validator-tool-set