kevinrue/unisets

Issues

• Store metadata specific to the type of identifier

  #62 opened 5 years ago by kevinrue
  0

• Demonstrate org.*.egPATH for mapping between Entrez Gene and KEGG Pathways

  #61 opened 5 years ago by kevinrue
  0

• droplevels()

  #60 opened 5 years ago by kevinrue
  0

• subset(..., drop=TRUE|FALSE)

  #59 opened 5 years ago by kevinrue
  0

• Rename elementData and setData to elementInfo and setInfo

  #54 opened 5 years ago by kevinrue
  0

• Backup schematic of class design

  #58 opened 5 years ago by kevinrue
  0

• Type element and set as character in the show method

  #52 opened 6 years ago by kevinrue
  0

• Condense view of elementData and setData

  #53 opened 6 years ago by kevinrue
  0

• Handle package data objects and documentation better

  #56 opened 6 years ago by kevinrue
  0

• Should `setLengths` return "deduplicated" set lengths?

  #42 opened 6 years ago by kevinrue
  0

• IndexedRelations

  #47 opened 6 years ago by LTLA
  4

• Should `duplicated` take into account relation metadata?

  #41 opened 6 years ago by kevinrue
  1

• add `duplicated`, `unique`, and `union` on `BaseSets`.

  #39 opened 6 years ago by kevinrue
  0

• Add `c(...)` function

  #36 opened 6 years ago by kevinrue
  1

• subset(..., drop) controls whether to drop empty sets and elements

  #37 opened 6 years ago by kevinrue
  1

• vignette needs a section to describe GOSets

  #34 opened 6 years ago by kevinrue
  0

• "annotation" slot on subclasses of `IdVector`

  #32 opened 6 years ago by kevinrue
  1

• Add `GOSets` class derived from `BaseSets`

  #13 opened 6 years ago by kevinrue
  0

• Identify duplicate and extract unique relationships

  #29 opened 6 years ago by kevinrue
  0

• man page minor fix

  #27 opened 6 years ago by robertamezquita
  1

• `import` from GO annotations rather than `as`

  #16 opened 6 years ago by kevinrue
  0

• Allow for duplicated elements?

  #5 opened 6 years ago by robertamezquita
  1

• Add write.gmt function

  #6 opened 6 years ago by robertamezquita
  1

• Add import.gmt

  #3 opened 6 years ago by robertamezquita
  6

• Add rownames/set IDs to output of `setData()`

  #17 opened 6 years ago by robertamezquita
  0