knutdrand
Bioinformatician working on Genome and Epigenome Regulation in Embryo Development, Ageing and Disease
Oslo University HospitalOslo
Pinned Repositories
npstructures
adventofcode2020
Solutions to https://adventofcode.com/2020
bdgtools
bionumpy
bionumpy-benchmarks
Snakemake workflow for running benchmarks for bionumpy
bnp_assembly
bnp_ml
bnp_pdb
milem
milpool
Pooling functions for MIL
knutdrand's Repositories
knutdrand/adventofcode2020
Solutions to https://adventofcode.com/2020
knutdrand/bdgtools
knutdrand/milem
knutdrand/milpool
Pooling functions for MIL
knutdrand/caupy
Implementations of causal inference concepts
knutdrand/chiptools
tools for working with chip data sets
knutdrand/cookiecutter-pypackage
Cookiecutter template for a Python package.
knutdrand/epigeneticclock
Calculate DNA methylation age using Horvath 2013 method
knutdrand/histonevariants
Analysis of histone variant data
knutdrand/hmmacs
knutdrand/human_embryo_chipseq
knutdrand/immuneML
immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.
knutdrand/learning_deep_learning
knutdrand/m6a-analysis
knutdrand/math-notes
knutdrand/more-itertools
More routines for operating on iterables, beyond itertools
knutdrand/mu-chip
knutdrand/octsoxnanog
knutdrand/peak-eval
Snakemake workflow to evaluate peak calling
knutdrand/pycrlb
knutdrand/pythonic_plots
knutdrand/receptorMIL
Multiple instance learning for immune receptors
knutdrand/shared
knutdrand/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
knutdrand/snakemake-tutorial
Tutorial for snakemake
knutdrand/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
knutdrand/snakemakes
knutdrand/teaching
knutdrand/testingkage
knutdrand/thesis