krassowski
Mike for short. Wrangling omics data, helping out with @jupyter.
University of Oxford | @QuansightOxford, UK
Pinned Repositories
jupyterlab-lsp
Coding assistance for JupyterLab (code navigation + hover suggestions + linters + autocompletion + rename) using Language Server Protocol
Anki-Night-Mode
Enabling studying at night with Anki - without eye strain
complex-upset
A library for creating complex UpSet plots with ggplot2 geoms
easy-entrez
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
jupyter-manim
manim cell magic for IPython/Jupyter to show the output video
jupyterlab-citation-manager
Citation Manager for JupyterLab using Zotero Web API
jupyterlab-dagitty
JupyterLab renderer of dagitty causal diagrams
jupyterlab-go-to-definition
Navigate to variable's definition with a click in JupyterLab (or with a few key strokes)
jupyterlab-lsp
Coding assistance for JupyterLab (code navigation + hover suggestions + linters + autocompletion + rename) using Language Server Protocol
multi-omics-state-of-the-field
Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
krassowski's Repositories
krassowski/jupyterlab-lsp
Coding assistance for JupyterLab (code navigation + hover suggestions + linters + autocompletion + rename) using Language Server Protocol
krassowski/jupyterlab-transformers-completer
Inline completion provider using tranformers.js for JupyterLab
krassowski/jupyterlab-color-picker
Colo(u)r picker for JupyterLab 4+ and Jupyter Notebook 7+
krassowski/jupyterlab
JupyterLab computational environment.
krassowski/jupyterlab-web-llm-completer
JupyterLab 4.1/Notebook 7.1 offline LLM completer (no data leaves your browser) powered by web-llm
krassowski/argo-jupyter-scheduler
Extending Jupyter-Scheduler to use Argo-Workflows as a backend.
krassowski/Codemirror-CSS-color-picker
A codemirror extension that adds a color picker input next to CSS color values. Development happens on Replit, just fork and hit run! https://replit.com/@util/Codemirror-CSS-color-picker
krassowski/extension-template
A `copier` template for JupyterLab extensions
krassowski/ipython
Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.
krassowski/jupyter-ai
A generative AI extension for JupyterLab
krassowski/jupyter-server-nbmodel
Jupyter Server NbModel
krassowski/jupyter_collaboration
A Jupyter Server Extension Providing Support for Y Documents
krassowski/jupyter_releaser
A set of helper scripts and GitHub Actions to aid in automated releases of Python and npm packages.
krassowski/jupyter_server
The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications.
krassowski/jupyter_ydoc
Jupyter document structures for collaborative editing using Yjs/Ypy
krassowski/jupyterhub
Multi-user server for Jupyter notebooks
krassowski/jupyterlab-execute-time
A JupyterLab extension for displaying cell timings
krassowski/jupyterlab-feedstock
A conda-smithy repository for jupyterlab.
krassowski/jupyterlab-git
A Git extension for JupyterLab
krassowski/jupyterlab_server
A set of server components for JupyterLab and JupyterLab like applications
krassowski/krassowski
krassowski/langchain
🦜🔗 Build context-aware reasoning applications
krassowski/nb_conda_kernels
Package for managing conda environment-based kernels inside of Jupyter
krassowski/nebari
🪴 Nebari - your open source data science platform
krassowski/nebari-docker-images
📦 Ready to use Docker images maintained by the Nebari team
krassowski/nebari-docs
📖 Documentation for Nebari
krassowski/nebari-jupyterhub-theme
🎨 Nebari custom JupyterHub theme
krassowski/notebook
Jupyter Interactive Notebook
krassowski/pytest-check-links
pytest plugin that checks URLs
krassowski/vscode-binder
VS Code on Binder