krassowski/multi-omics-state-of-the-field

Issues

• Prepare repository for referencing in the manuscript

  #22 opened 4 years ago by krassowski
  3

• Create a "strong" subset - with search terms in abstract or title

  #13 opened 4 years ago by krassowski
  1

• Explore application of BioNLP text mining API from NCBI

  #1 opened 4 years ago by krassowski
  2

• Make the repository public

  #26 opened 4 years ago by vd4mmind
  1

• Investigate the missing DOIs in 2016

  #4 opened 4 years ago by krassowski
  3

• multi-omics methods pubished till date (Review article and figure)

  #14 opened 4 years ago by vd4mmind
  4

• Add R-dependencies with packrat

  #20 opened 4 years ago by krassowski
  2

• Update the caption E) in the GitHub ReadMe

  #25 opened 4 years ago by vd4mmind
  1

• Creating the systematic flow diagram for the Omics.ipynb for MS mutiple panel figure

  #15 opened 4 years ago by vd4mmind
  4

• Captions and methods description

  #18 opened 4 years ago by krassowski
  28

• Fetch data from DOI registers and Web of Science or similar

  #5 opened 4 years ago by krassowski
  2

• Compare the disease term frequency against "background"

  #11 opened 4 years ago by krassowski
  3

• Deep learning and neural network articles

  #16 opened 4 years ago by krassowski
  2

• Feedback on the omics

  #10 opened 4 years ago by krassowski
  21

• Normalize the timeline plot against the number of articles published in the journals we consider

  #12 opened 4 years ago by krassowski
  14

• Use extracted link and semantic features in article typ prediction

  #17 opened 4 years ago by krassowski
  0

• Search terms to exclude

  #3 opened 4 years ago by krassowski
  2

• Decide on the article type inclusion/exclusion and grouping

  #2 opened 4 years ago by krassowski
  0

• Classify into topics "Application of a method", "Introduction of a method"

  #7 opened 4 years ago by krassowski
  7

• Search terms

  #9 opened 4 years ago by krassowski
  3

• Screen for code availability statements

  #6 opened 4 years ago by krassowski
  0

• Search for package and dataset links

  #8 opened 4 years ago by krassowski
  2