kriskiil

Pinned Repositories

algo
Language:Java0 1 00
cgmlstsearch
Proof of concept implementation for indexed similarity search of a cgMLST profile against a database.
Language:Python1 1 01
mlst
:id: Scan contig files against PubMLST typing schemes
Language:Perl00
Roary
Rapid large-scale prokaryote pan genome analysis
Language:Perl0 1 00
shovill
Faster SPAdes assembly of Illumina reads
Language:Perl0 1 00
swalign
Smith-Waterman local aligner
Language:Python0 1 00
ssi-listeria-molsero
molecular serotyping script for Listeria monocytogenes by Kristoffer Kiil
Language:Python1 2 00
bifrost
6 3 556
bifrost_chewbbaca
Language:Python1 6 01
shovill
⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads
Language:Perl213 17 17445

kriskiil's Repositories

kriskiil/cgmlstsearch
Proof of concept implementation for indexed similarity search of a cgMLST profile against a database.
Language:Python1 1 01
kriskiil/algo
Language:Java0 1 00
kriskiil/mlst
:id: Scan contig files against PubMLST typing schemes
Language:Perl00
kriskiil/Roary
Rapid large-scale prokaryote pan genome analysis
Language:Perl0 1 00
kriskiil/shovill
Faster SPAdes assembly of Illumina reads
Language:Perl0 1 00
kriskiil/swalign
Smith-Waterman local aligner
Language:Python0 1 00