kunstner
Bioinformatician. Statistician. Data squeezer. Omics-addicted with strong focus on #microbiome and #cancer.
University of LübeckGermany
Pinned Repositories
2021_BPLxHFD_paper
2021_EB_paper
Plots/Analysis EB Paper
2022_canine_atopic_dermatitis_paper
condetri
Automatically exported from code.google.com/p/condetri
freec2gistic
Workflow: Convert CONTROL-freec output to GISTIC2
NGS_tools
Collection of tools for next generation sequencing analysis
TF_enrichment_analysis
COVIDomics paper: Transcription factor activity network
usefulStuff
Collection of useful links
kunstner's Repositories
kunstner/freec2gistic
Workflow: Convert CONTROL-freec output to GISTIC2
kunstner/TF_enrichment_analysis
COVIDomics paper: Transcription factor activity network
kunstner/usefulStuff
Collection of useful links
kunstner/2021_BPLxHFD_paper
kunstner/2021_EB_paper
Plots/Analysis EB Paper
kunstner/2022_canine_atopic_dermatitis_paper
kunstner/2022_Fiber_DMII_Middle_East
kunstner/awesome-deepbio
A curated list of awesome deep learning applications in the field of computational biology
kunstner/condetri
Automatically exported from code.google.com/p/condetri
kunstner/NGS_tools
Collection of tools for next generation sequencing analysis
kunstner/counts2tpm
counts to tpm/fpkm
kunstner/EGP_delly
delly workflow for EGP
kunstner/fifer
a collection of R functions for data manipulation, data analysis, and plotting
kunstner/kunstner
Config files for my GitHub profile.
kunstner/kunstner.github.io
https://kunstner.github.io/
kunstner/MMRd
Predicting MMR status based on Albayrak et al. (2020)
kunstner/mmsig
A method for fitting a known mutational signature reference to mutational catalogues from cancer samples
kunstner/NGS_scripts
kunstner/reference_data
Reference data: BED files, genes, transcripts, variations.
kunstner/sciclone
An R package for inferring the subclonal architecture of tumors
kunstner/Tools-Microbiome-Analysis
A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
kunstner/vep
Recipe for VEP + Cache