Pinned Repositories
abdiv
Alpha and beta diversity measures for community ecology
brocc
Consensus taxonomy assignment for short reads (great for fungi)
kylesthesis
PhD thesis on mediated spin-orbit coupling in acetylene
pheatbuilder
R library to build a heatmap in stages
polyafit
Fit data to a multivariate Polya (a.k.a. Dirichlet-multinomial) distribution
q2-brocc
QIIME 2 plugin for the BROCC taxonomic classifier
qiimer
Quantitative Insights Into Microbial Ecology - parsing and plotting functions for R
taxafmt
usedist
Functions for distance matrix objects in R.
unassigner
Type strain identification for 16S reads
kylebittinger's Repositories
kylebittinger/kylesthesis
PhD thesis on mediated spin-orbit coupling in acetylene
kylebittinger/airway-fungi-paper
Data and software for the Genome Biology paper, "Enhanced stringency analysis of fungi from healthy and immunocompromised human airway reveals covariation with bacterial populations"
kylebittinger/kylesdotfiles
kylebittinger/lockdown
Check to see if files or variables have changed
kylebittinger/widewonder
Codebase for the band Wide Wonder