Pinned Repositories
DeepCoil
Fast and accurate prediction of coiled coil domains in protein sequences.
DeepCoil_Paper_2018
Scripts and jupyter notebooks necessary to replicate the analyses presented in the DeepCoil paper 2018.
EdgeGat
graph neural network layer for Deep Graph Library with pytorch backend
graph_toolbox
utilities for processing protein structures
HAMPpred
Assessing the conformational landscape of the HAMP domain with AlphaFold2
lbs-tools
localpdb
Python package to manage protein structures and their annotations
PiPred
Deep learning based prediction of pi-helices in protein sequences
pLM-BLAST
Detection of remote homology by comparison of protein language model representations
rossmann-toolbox
Prediction and re-engineering of the cofactor specificity of Rossmann-fold proteins
Laboratory of Structural Bioinformatics's Repositories
labstructbioinf/localpdb
Python package to manage protein structures and their annotations
labstructbioinf/pLM-BLAST
Detection of remote homology by comparison of protein language model representations
labstructbioinf/DeepCoil
Fast and accurate prediction of coiled coil domains in protein sequences.
labstructbioinf/EdgeGat
graph neural network layer for Deep Graph Library with pytorch backend
labstructbioinf/rossmann-toolbox
Prediction and re-engineering of the cofactor specificity of Rossmann-fold proteins
labstructbioinf/PiPred
Deep learning based prediction of pi-helices in protein sequences
labstructbioinf/lbs-tools
labstructbioinf/graph_toolbox
utilities for processing protein structures
labstructbioinf/DeepCoil_Paper_2018
Scripts and jupyter notebooks necessary to replicate the analyses presented in the DeepCoil paper 2018.
labstructbioinf/HAMPpred
Assessing the conformational landscape of the HAMP domain with AlphaFold2
labstructbioinf/samcc_turbo
Software for automatic detection and measurement of coiled coils in PDB structures.
labstructbioinf/dc2_oligo
Prediction of oligomeric state of coiled-coil domains
labstructbioinf/edi
labstructbioinf/MDDesign
Set of scripts that facilitate molecular dynamics aided screening of the models generated with Rosetta and selection of the structural ensembles that can be used as input in protein design simulations.
labstructbioinf/localpdb-mybinder
localpdb mybinder example
labstructbioinf/.github
labstructbioinf/ColabFold
Making Protein folding accessible to all!
labstructbioinf/Uni-Fold
An open-source platform for developing protein models beyond AlphaFold.