Pinned Repositories
ArchivedTools
some previous finished tools
atac-seq-pipeline
ENCODE ATAC-seq pipeline
bioinfo-pipelines
classical pipelines in bioinformatics
bt2m
A iteratively bifurcated clustering method for single-cell sequencing
chip-seq-pipeline2
ENCODE ChIP-seq pipeline
ConSurf-StandAlone
Stand Alone version of ConSurf with detailed tutorial - (installation + database + usage)
CRC-hub
A hub of resources to study CRC.
Exp_protocols
Common experiment protocols in my lab
RToolbox
Toolsets for bioinformatics data analysis (R package)
scGRN
A tool for gene regulatory network (GRN) construction and visualization
leezx's Repositories
leezx/ConSurf-StandAlone
Stand Alone version of ConSurf with detailed tutorial - (installation + database + usage)
leezx/RToolbox
Toolsets for bioinformatics data analysis (R package)
leezx/atac-seq-pipeline
ENCODE ATAC-seq pipeline
leezx/bioinfo-pipelines
classical pipelines in bioinformatics
leezx/chip-seq-pipeline2
ENCODE ChIP-seq pipeline
leezx/scGRN
A tool for gene regulatory network (GRN) construction and visualization
leezx/simpleCloud
store some simple PDF files
leezx/ArchivedTools
some previous finished tools
leezx/bt2m
A iteratively bifurcated clustering method for single-cell sequencing
leezx/CRACI
Condition-based Regulatory Architecture and Causality Inference from Single-Cell Data
leezx/CRC-hub
A hub of resources to study CRC.
leezx/cut-run-pipeline
a standard analytic pipeline for cut&run data
leezx/ENSatlas
ENS Atlas database
leezx/Exp_protocols
Common experiment protocols in my lab
leezx/gatk4-jupyter-notebook-tutorials
This repository contains Jupyter Notebooks containing GATK Best Practices Workflows
leezx/GWA_tutorial
A comprehensive tutorial about GWAS and PRS
leezx/leezx.github.io
Personal website
leezx/MBSIT
marker-based subgroup identification tool
leezx/ModuleSelection
find the gene structure in a expression matrix
leezx/scvelo_notebooks
leezx/TI
trajectory inference methods
leezx/VariantToGene
Genomic predictors and Annotation predictors
leezx/WGS_Pipeline_BestPractice
WGS_Pipeline_BestPractice