leezx

leezx's Stars

• pytorch/pytorch

  Tensors and Dynamic neural networks in Python with strong GPU acceleration

  Language:Python88.7k1.8k50.1k23.8k

• 1Panel-dev/MaxKB

  💬 MaxKB is a ready-to-use RAG chatbot that features robust workflow and MCP tool-use capabilities. It supports a wide range of mainstream large language models (LLMs), including DeepSeek-R1, Llama 3.3, OpenAI, among others.

  Language:Python15.5k991.3k2k

• lyhue1991/eat_pytorch_in_20_days

  Pytorch🍊🍉 is delicious, just eat it! 😋😋

  Language:Jupyter Notebook5.6k60311.2k

• ArcInstitute/evo2

  Genome modeling and design across all domains of life

  Language:Jupyter Notebook2.7k3263268

• lyhue1991/torchkeras

  Pytorch❤️ Keras 😋😋

  Language:Jupyter Notebook1.9k19103250

• evo-design/evo

  Biological foundation modeling from molecular to genome scale

  Language:Jupyter Notebook1.4k2672164

• kzbkzb/Python-AI

  深度学习100例、深度学习DL、图片分类、目标识别、目标检测、自然语言处理nlp、文本分类、TensorFlow、PyTorch

  Language:Jupyter Notebook1.3k112259

• nanxstats/ggsci

  🦄 Scientific journal and sci-fi themed color palettes for ggplot2

  Language:R680173471

• LPDI-EPFL/masif

  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

  Language:Python6462484162

• GreenleafLab/ArchR

  ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

  Language:R410141.1k143

• dylkot/cNMF

  Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data

  Language:Jupyter Notebook320510661

• cortes-ciriano-lab/SComatic

  A tool for detecting somatic variants in single cell data

  Language:Python19637430

• dvolgyes/zenodo_get

  Zenodo_get: Downloader for Zenodo records

  Language:Python15841422

• renozao/NMF

  NMF: A Flexible R package for Nonnegative Matrix Factorization

  Language:R1431518341

• sanderlab/scPerturb

  scPerturb: A resource and a python/R tool for single-cell perturbation data

  Language:Jupyter Notebook1185297

• carmonalab/GeneNMF

  Methods to discover gene programs on single-cell data

  Language:R1062215

• tiroshlab/3ca

  Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".

  Language:R10231012

• immunogenomics/SCENT

  Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA

  Language:R74131410

• HaojiaWu/plot1cell

  A R package for advanced single cell data viz

  Language:R6621029

• biomed-AI/PROTAC-RL

  Language:Python611725

• theislab/AutoGeneS

  Language:Jupyter Notebook595278

• Fenglei104/DeepPROTACs

  Language:Python5321418

• Rbfinch/grepq

  quickly filter fastq files by matching sequences to a set of regex patterns

  Language:Rust50120

• LJI-Bioinformatics/Excel-Reverse-Complement

  A simple add-in for Excel supplying functions to calculate the reverse, complement, and reverse-complement of a nucleotide sequence

  Language:VBA445915

• bernardo-de-almeida/motif-clustering

  Clustering TF motif models from multiple species (mostly focused on Drosophila and human) by similarity to remove redundancy

  Language:R26105

• Vivianstats/scINSIGHT

  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data

  Language:C++211112

• landau-lab/PATH

  Language:R17440

• TAPE-Lab/Qin-CardosoRodriguez-et-al

  Scripts and notebooks for Qin & Cardoso Rodriguez et al

  Language:Jupyter Notebook10102

• benoukraflab/TFregulomeR

  TFregulomeR reveals transcription factors’ context-specific features and functions

  Language:R7000

• aertslab/scatac_fragment_tools

  Tools for working with scATAC-seq fragment files

  Language:Python6550