leoisl/plasnet

Issues

• Switch to unweighted classification

  #61 opened 7 months ago by leoisl
  1

• fix: mark with stars the nodes we actually use in clustering as hubs

  #60 opened 8 months ago by leoisl
  0

• Second iteration hub plasmids not marked in visualisation

  #55 opened a year ago by babayagaofficial
  3

• bug: key error exception when building RH PLSDB DB

  #56 opened a year ago by leoisl
  0

• Create a blackholes.csv file in the output explicitly denoting each blackhole in each community

  #47 opened a year ago by leoisl
  0

• Switch terminology from blackhole to hub

  #48 opened a year ago by leoisl
  0

• Recent changes (v0.3.3 and v0.3.4) might have made plasnet slow for very large graphs

  #41 opened a year ago by leoisl
  2

• Make --add-sample-hits subcommand accept communities

  #40 opened a year ago by leoisl
  0

• ACT images on the edges

  #25 opened a year ago by leoisl
  0

• Avoid using same colours for different neighbouring typings

  #21 opened a year ago by leoisl
  0

• Add bottom table with metadata/data about selected nodes

  #22 opened a year ago by leoisl
  1

• Add hit proportion filter

  #23 opened a year ago by leoisl
  1

• Add number of genes, number of hit genes to visualisation

  #24 opened a year ago by leoisl
  1

• Were you tempted to call it planet?

  #1 opened a year ago by iqbal-lab
  1