Pinned Repositories
analysis-salt-responsive
Analysis of 16S sequencing data for paper "Salt-responsive gut commensal modulates TH17 axis and disease"
awesome-go-China
A curated list of awesome Go frameworks, libraries and software written by Ethnic Chinese.
bio101-metatranscript
books
常用书籍
canu
A single molecule sequence assembler for genomes large and small.
easy_EzBioCloud
batch upload 16S rRNA sequences search against EzBioCloud's database for identification
ggcor
Extended tools for correlation analysis and visualization.
GoogleSearchCrawler
a tool for crawl Google search results
I-VIP
Integron Visualization and Identification Pipeline
Integron_Finder
Bioinformatics tool to find integrons in bacterial genomes
lianzhh's Repositories
lianzhh/easy_EzBioCloud
batch upload 16S rRNA sequences search against EzBioCloud's database for identification
lianzhh/analysis-salt-responsive
Analysis of 16S sequencing data for paper "Salt-responsive gut commensal modulates TH17 axis and disease"
lianzhh/awesome-go-China
A curated list of awesome Go frameworks, libraries and software written by Ethnic Chinese.
lianzhh/bio101-metatranscript
lianzhh/books
常用书籍
lianzhh/canu
A single molecule sequence assembler for genomes large and small.
lianzhh/ggcor
Extended tools for correlation analysis and visualization.
lianzhh/GoogleSearchCrawler
a tool for crawl Google search results
lianzhh/I-VIP
Integron Visualization and Identification Pipeline
lianzhh/Integron_Finder
Bioinformatics tool to find integrons in bacterial genomes
lianzhh/intervene-shiny
An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps
lianzhh/ISfinder-sequences
Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biotoul.fr/)
lianzhh/kggseq-go
lianzhh/Krona
Interactively explore metagenomes and more from a web browser.
lianzhh/LCAStar
Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree
lianzhh/megan-ce
MEGAN Community Edition
lianzhh/multi-metagenome
lianzhh/ncbitax2lin
Convert NCBI taxonomy dump into lineages
lianzhh/PAPER_LeeSorensen_ISMEJ_2017
Workflows and R scripts for Lee and Sorensen et al
lianzhh/PhaGCN
GCN classifier for phage taxanomy classification
lianzhh/PhaTYP
PhaTYP: Predicting lifestyle for bacteriophages using BERT
lianzhh/PlasFlow
Software for prediction of plasmid sequences in metagenomic assemblies
lianzhh/plasmidminer
:mag: in silico plasmid extraction
lianzhh/r4ds
R for data science
lianzhh/rgi
Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
lianzhh/RNAseq-DE-analysis-with-R
lianzhh/sickle
Windowed Adaptive Trimming for fastq files using quality
lianzhh/tiptoft
Predict plasmids from uncorrected long read data
lianzhh/ViPTreeGen
a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree
lianzhh/yangtao309.github.com