linghuichen

linghuichen's Stars

• microsoft/protein-frame-flow

  Fast protein backbone generation with SE(3) flow matching.

  Language:Python22721

• felixjwong/antibioticsai

  Supporting code for the paper "Discovery of a structural class of antibiotics with explainable deep learning"

  Language:Jupyter Notebook8613

• GFNOrg/torchgfn

  A modular, easy to extend GFlowNet library

  Language:Jupyter Notebook23230

• GFNOrg/gflownet

  Generative Flow Networks

  Language:Python60376

• KULL-Centre/_2023_Blaabjerg_SSEmb

  Language:Jupyter Notebook211

• OATML-Markslab/ProteinNPT

  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"

  Language:Python828

• OATML/non-parametric-transformers

  Code for "Self-Attention Between Datapoints: Going Beyond Individual Input-Output Pairs in Deep Learning"

  Language:Python40641

• johnyang101/pmpnndiff

  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion

  Language:Python14

• Xwin-LM/Xwin-LM

  Xwin-LM: Powerful, Stable, and Reproducible LLM Alignment

  Language:Python1k41

• generatebio/chroma

  A generative model for programmable protein design

  Language:Python69291

• jozhang97/MutateEverything

  Language:Python636

• uniaudio666/UniAudio

  The official source code of UniAudio

  Language:Python836

• ProteinDesignLab/protpardelle

  Diffusion-based all-atom protein generative model.

  Language:Python16714

• microsoft/evodiff

  Generation of protein sequences and evolutionary alignments via discrete diffusion models

  Language:Python52173

• Kuhlman-Lab/ThermoMPNN

  GNN trained to predict changes in thermodynamic stability for protein point mutants

  Language:Python12519

• Plachtaa/VALL-E-X

  An open source implementation of Microsoft's VALL-E X zero-shot TTS model. Demo is available in https://plachtaa.github.io/vallex/

  Language:Python7.7k762

• facebookresearch/fairseq2

  FAIR Sequence Modeling Toolkit 2

  Language:Python70083

• facebookresearch/riemannian-fm

  code for "Riemannian Flow Matching on General Geometries".

  Language:Python17714

• jzhang-github/AGAT

  Atomic Graph ATtention networks

  Language:Python15

• Algomancer/Bayesian-Flow-Networks

  A simple implimentation of Bayesian Flow Networks (BFN)

  Language:Jupyter Notebook23915

• SizheQiu/DLTKcat

  Deep learning based prediction of temperature dependent enzyme turnover rates

  Language:Jupyter Notebook118

• Wublab/Pythia

  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations

  Language:Python253

• HySonLab/Ligand_Generation

  Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning

  Language:Python263

• atong01/conditional-flow-matching

  TorchCFM: a Conditional Flow Matching library

  Language:Python1.2k100

• facebookresearch/audiocraft

  Audiocraft is a library for audio processing and generation with deep learning. It features the state-of-the-art EnCodec audio compressor / tokenizer, along with MusicGen, a simple and controllable music generation LM with textual and melodic conditioning.

  Language:Python21k2.2k

• LlamaFamily/Llama-Chinese

  Llama中文社区，Llama3在线体验和微调模型已开放，实时汇总最新Llama3学习资料，已将所有代码更新适配Llama3，构建最好的中文Llama大模型，完全开源可商用

  Language:Python14k1.3k

• debbiemarkslab/EVmutation

  Mutation effects predicted from sequence co-variation

  Language:HTML6112

• jafetgado/tomerdesign

  Improving enzyme optimum temperature prediction with resampling strategies and ensemble learning

  Language:Python41

• karpathy/llama2.c

  Inference Llama 2 in one file of pure C

  Language:C17.5k2.1k

• melobio/EvoPlay

  Language:Python6611