linnarsson-lab/loom-viewer

Issues

• Error while trying to view the loom file

  #162 opened 6 years ago by araksm
  7

• loom-viewer doesn't open

  #166 opened 5 years ago by MahdiMoradiMarjaneh
  4

• site-packages/loom_viewer/static missing after pip install

  #163 opened 5 years ago by kgerman73
  2

• `ModuleNotFoundError: No module named 'gevent.wsgi'` on any invocation of `$ loom`

  #158 opened 6 years ago by ivirshup
  3

• Fetch failed, checking IndexedDB cache

  #160 opened 6 years ago by NaomiBreslin
  2

• Update file metadata cache if folder name changes

  #156 opened 7 years ago by JobLeonard
  0

• Automatically remove server cache for non-existing loom-files

  #157 opened 7 years ago by JobLeonard
  0

• Use RBush for point detection

  #155 opened 7 years ago by JobLeonard
  1

• Investigate accessible-autocomplete as an alternative to react-select

  #154 opened 7 years ago by JobLeonard
  0

• Download loom file improvements

  #146 opened 7 years ago by JobLeonard
  3

• Size of heatmap/categorical buttons can be broken

  #153 opened 7 years ago by JobLeonard
  0

• reminder: send email to group when upgrading

  #152 opened 7 years ago by JobLeonard
  0

• Scale disappears in sparkline view

  #151 opened 7 years ago by pl-ki
  2

• Tooltips in sparkline view

  #150 opened 7 years ago by pl-ki
  0

• Potential conferences to apply to

  #140 opened 7 years ago by JobLeonard
  4

• HTTPS

  #149 opened 7 years ago by JobLeonard
  0

• Custom color schemes

  #147 opened 7 years ago by JobLeonard
  3

• Remove reliance on getImageData in scatterplot

  #145 opened 7 years ago by JobLeonard
  0

• Document conventions for special attribute names

  #148 opened 7 years ago by JobLeonard
  0

• Web-interface for expanding loom files

  #114 opened 7 years ago by JobLeonard
  2

• Optimisation: memoize computations

  #115 opened 7 years ago by JobLeonard
  1

• Generate new `cortex.loom` with correct row order

  #132 opened 7 years ago by JobLeonard
  1

• prepare_heatmap() wasn't fully updated

  #137 opened 7 years ago by JobLeonard
  3

• Getting `loom` to work from the Windows command line

  #139 opened 7 years ago by JobLeonard
  6

• Color all cell clusters even when they are > 20

  #141 opened 7 years ago by pl-ki
  4

• Better number rounding in JSON array conversion

  #144 opened 7 years ago by JobLeonard
  1

• Helper functions for listing/creating/opening loom files in the loom-datasets folder

  #143 opened 7 years ago by JobLeonard
  0

• In Cellscatter view, Use 'ClusterName' if they exist instead of 'Clusters' for labelling

  #142 opened 7 years ago by pl-ki
  1

• dropdown UI issues

  #118 opened 7 years ago by slinnarsson
  2

• paint.directly()-related bugs in sparkline

  #123 opened 7 years ago by JobLeonard
  1

• Favicon

  #131 opened 7 years ago by JobLeonard
  0

• Export selected genes to CSV

  #138 opened 7 years ago by JobLeonard
  8

• error at "tile" step, do not see all data in chrome

  #134 opened 7 years ago by eLinanin
  15

• Sharing URL replaced with "undefined" when opening a dataset twice

  #136 opened 7 years ago by JobLeonard
  0

• Better averaging strategy for heatmap tiles

  #135 opened 7 years ago by JobLeonard
  1

• Set up robots.txt, etc for search engines

  #133 opened 7 years ago by JobLeonard
  1

• mental note: explore prune-clustering

  #130 opened 7 years ago by JobLeonard
  0

• Tells me to use Chrome instead of Safari...but I'm using Chrome

  #126 opened 7 years ago by jamestwebber
  12

• Question regarding Loom CLI

  #129 opened 7 years ago by JobLeonard
  4

• License

  #128 opened 7 years ago by JobLeonard
  2

• Figure out blocking CSS problem so we can get the latest version on pip

  #127 opened 7 years ago by JobLeonard
  1

• Some columns missing in Cell Metadata view

  #120 opened 7 years ago by slinnarsson
  3

• [scatterplot] "lock ratio" option for x/y attributes

  #125 opened 7 years ago by JobLeonard
  0

• [scatterplot] ignore inappropriate settings when using string-based attributes

  #124 opened 7 years ago by JobLeonard
  0

• Alignment of attributes on heatmap

  #117 opened 7 years ago by slinnarsson
  0

• [sparkline] avoid awkward small, uneven grouping, and confusing column stretching

  #122 opened 7 years ago by JobLeonard
  0

• Command parser bug

  #116 opened 7 years ago by slinnarsson
  4

• Some numerical attributes are shown as text and vice versa

  #119 opened 7 years ago by slinnarsson
  7

• Safari bug

  #121 opened 7 years ago by JobLeonard
  0

• Make default value selection "smarter"

  #113 opened 7 years ago by JobLeonard
  1