Pinned Repositories
ActiveTransferLearning
Code for various active transfer learning projects.
ADTransitions
Estimating transition probabilities in a multi-state model for Alzheimer's Disease (AD)
Alcoholic-hepatitis-ML
ASD-Integration-Subtypes-Manuscript
Awesome-VAEs
A curated list of awesome work on VAEs, disentanglement, representation learning, and generative models.
bio-cca
Code accompanying the paper "A biologically plausible neural network for multi-channel Canonical Correlation Analysis"
brca_proteome-data
cancersea
a simple R data package for curated cancer pathway-specific gene lists
CancerTypePrediction-1D-CNN
This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".
MOMLIN_softwar
Multimodal and Omics Machine learning integration for drug response biomarker discovery
mamun41's Repositories
mamun41/ActiveTransferLearning
Code for various active transfer learning projects.
mamun41/ASD-Integration-Subtypes-Manuscript
mamun41/cancersea
a simple R data package for curated cancer pathway-specific gene lists
mamun41/CancerTypePrediction-1D-CNN
This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".
mamun41/cca_fusion
Code accompanying our ISBI 2021 paper "Multimodal Fusion using Sparse CCA for Breast Cancer Survival Prediction" https://arxiv.org/abs/2103.05432 by Vaishnavi Subramanian, Tanveer Syeda-Mahmood, Minh N. Do
mamun41/ccaFuse_lets-apply-scRNA
Feature fusion using Canonical Correlation Analysis (CCA)
mamun41/Chimera-in-network-of-Kuromoto-oscillators_m
This repository contains codes that I wrote while working on my MSc thesis. This work resulted in a research paper which is currently under review in "Frontiers in Physics". I will link the paper once the paper gets published.
mamun41/chimera_mechanism_interesting-fig
Julia code to explore the dynamics and mechanism of strong chimeras
mamun41/ConsensusTME
ConsensusTME Gene Sets and R Script
mamun41/Diffusion
Gray-Scott diffusion simulation in 2-dimensions and 3-dimensions
mamun41/FourOscModel
This repository contain codes used for the four-oscillator model of interpersonal synchronization.
mamun41/gradKCCA
Implementations of gradKCCA
mamun41/Gray-Scott-Finite-Difference-Model_2
mamun41/gray-scott_3
Gray-Scott Diffusion-Reaction Model Final Project
mamun41/HGSCCA_nonLinear
The source code for the paper "Hyper-graph based Sparse Canonical Correlation Analysis for the Diagnosis of Alzheimer’s Disease from Multi-dimensional Genomic Data"
mamun41/ICS_project3_m
Kuramoto model.
mamun41/kuramoto_model_and_synchroni_mzation
mamun41/kuramoto_model_integrate_and_plot_m
Numerical integration of the Kuramoto Model in Python 3
mamun41/KuramotoFiles_m
mamun41/Mouse_Aging_Epigenomics_2018
mamun41/mscca-regression-code-important
mamun41/multi-state-SOLVER
MATLAB/Octave code for numerically solving multi-state degree-based frameworks
mamun41/Multimodal-Brain-Tumor-Segmentation
Multimodal Brain Tumor Segmentation using BraTS 2018 Dataset.
mamun41/MultistateProcessesOnNetworks
A generic framework for simulating and calculating multistate dynamical processes on networks.
mamun41/MyKuramoto
Time-varying connectivity in networks of coupled oscillators
mamun41/sparsePCA
A guide for sparse PCA: model comparison
mamun41/switching-chimeras_m
Chimera states with critical switching dynamics