manulera
Working on ShareYourCloning - web app for FAIR cloning documentation.
University College LondonLondon
Pinned Repositories
cytosimGrammar
A grammar for cytosim
discussions_curation
A repository for more broad discussion of curation
genestorian_data_refinement
A project to extract genotype information from lab spreadsheets.
genestorian_data_refinement_GSoC
Genestorian data refinement information for possible GSoC2022 applicants
LeraRamirez2019
Files for Lera Ramirez and Nedelec 2019
printSvg2Pdf
A simple bash script to print an svg to pdf without extra margins using headless chrome.
ShareYourCloning
A web application to generate molecular cloning strategies in json format, and share them with others.
ShareYourCloning_backend
The backend application for ShareYourCloning
UnivarScatter
A univariate scatter plot for matlab
YeastDatabase
A symfony application to manage a yeast collection
manulera's Repositories
manulera/ShareYourCloning
A web application to generate molecular cloning strategies in json format, and share them with others.
manulera/ShareYourCloning_backend
The backend application for ShareYourCloning
manulera/ShareYourCloning_frontend
The frontend application for ShareYourCloning
manulera/ShareYourCloning_iframe
Embedding ShareYourCloning in an iframe
manulera/working-group-website
working-group-website
manulera/annotated-igem-distribution
A set of scripts to annotate the iGEM 2024 distribution using pLannotate
manulera/biohackathons.github.io
International BioHackathon Directory of Events, Projects and Communities
manulera/biopython
Official git repository for Biopython (originally converted from CVS)
manulera/dormancy-expression-viewer
manulera/GateWayMine
Tools to mine plasmid sequences, build Gateway consensus sites and make a web application to host plasmid database of Gateway plasmids
manulera/Krattenmacher_et_al_2024
Files to reproduce the simulations and theory in Krattenmacher et al. 2024
manulera/linkml
Linked Open Data Modeling Language
manulera/linkml-playground
linkml-playground
manulera/linkml_sqlmodel_issue
linkml_sqlmodel_issue
manulera/networkx
Network Analysis in Python
manulera/ontology_map_maker
Small SPA that makes ontology maps using mermaid
manulera/ove_playground
A minimal react app to play with teselagen's OVE
manulera/pLannotate
Webserver and command line tool for annotating engineered plasmids
manulera/pLannotate-api-docker
A simple FastAPI in docker to use plannotate
manulera/poster_synbio_biochemical_society_2024
manulera/pydna
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
manulera/pysbol3_playground
Playing around with pysbol3
manulera/seguid-compare
Simple SPA to compare two sequence with SEGUID
manulera/SnapGene_crawler
crawler for the SnapGene website, that lists all the plasmids in their collection
manulera/sqlmodel
SQL databases in Python, designed for simplicity, compatibility, and robustness.
manulera/sqlmodel_tutorial
sqlmodel_tutorial
manulera/test_fastapi_boilerplate
manulera/test_SQLModel-boilerplate
manulera/testing-nbstripout
Trying the nbstripout hook
manulera/tg-oss
Teselagen Open Source modules