Synthetic Biology Data Exchange Group

A group to coordinate the development of standards to facilitate data exchange in synthetic biology

Pinned Repositories

libSBOLj
Java Library for Synthetic Biology Open Language (SBOL)
Language:Java37 25 42024
pySBOL
SWIG-Python wrappers implementing SBOL 2.2
Language:C++25 25 1268
pySBOL2
A pure Python implementation of the SBOL standard.
Language:Python20 5 2346
pySBOL3
Native python implementation of SBOL 3.0 specification
Language:Python35 15 21715
SBOL-examples
A repository to share/discuss/ask/propose how to represent examples using SBOL and SBOLVisual.
Language:Jupyter Notebook2 11 194
SBOL-specification
The Synthetic Biology Open Language (SBOL)
Language:TeX13 24 2229
SBOL-utilities
Command-line utilities and scripts for manipulating SBOL data
Language:JavaScript12 11 13021
SBOL-visual
The reference implementation of the SBOL Visual standard
Language:HTML32 30 9716
SBOLDesigner
SBOL Designer Project
Language:Java27 11 3147
sboljs3
A library for the Synthetic Biology Open Language (SBOL) written in TypeScript, for JavaScript/TypeScript applications in the browser or node.js
Language:TypeScript4 2 210

Synthetic Biology Data Exchange Group's Repositories

SynBioDex/libSBOLj
Java Library for Synthetic Biology Open Language (SBOL)
Language:Java37 25 42024
SynBioDex/pySBOL3
Native python implementation of SBOL 3.0 specification
Language:Python35 15 21715
SynBioDex/SBOL-visual
The reference implementation of the SBOL Visual standard
Language:HTML32 30 9716
SynBioDex/pySBOL2
A pure Python implementation of the SBOL standard.
Language:Python20 5 2346
SynBioDex/tyto
Use ontology terms in your Python application
Language:Python18 9 553
SynBioDex/SBOL-specification
The Synthetic Biology Open Language (SBOL)
Language:TeX13 24 2229
SynBioDex/SBOL-utilities
Command-line utilities and scripts for manipulating SBOL data
Language:JavaScript12 11 13021
SynBioDex/SBOLCanvas
Language:HTML11 26 1496
SynBioDex/SEPs
SBOL Enhancement Proposals
Language:Python10 18 5916
SynBioDex/Community-Media
This repository is intended to be a "one stop" location for finding all of the publicly presented papers, posters, and talks that have been given on SBOL.
Language:Jupyter Notebook9 17 413
SynBioDex/SBOL-Validator
A web application to validate SBOL files
Language:HTML7 11 1013
SynBioDex/sbol_factory
The SBOLFactory provides a mechanism for automatically generating an interactive, object-oriented API from a declarative data model specification encoded in OWL.
Language:Python5 2 513
SynBioDex/SBOLTestSuite
Language:Java5 30 1910
SynBioDex/Excel-to-SBOL
Language:Python4 4 657
SynBioDex/sboljs3
A library for the Synthetic Biology Open Language (SBOL) written in TypeScript, for JavaScript/TypeScript applications in the browser or node.js
Language:TypeScript4 2 210
SynBioDex/SbolStandardWebsite
Language:TeX4 10 1073
SynBioDex/SBOLExplorer
Language:UnrealScript3 20 572
SynBioDex/SBOL-examples
A repository to share/discuss/ask/propose how to represent examples using SBOL and SBOLVisual.
Language:Jupyter Notebook2 11 194
SynBioDex/SBOL_website
Repository for documenting issues with the SBOL website at http://www.sbolstandard.org/
2 7 1280
SynBioDex/dnaplotlib2
DNA plotting library for Python
Language:Python1 9 11
SynBioDex/Excel-utilities
Language:Python1 10 7
SynBioDex/libSBOLj3
A Java library for the Synthetic Biology Open Language version 3
Language:Java1 0 0
SynBioDex/SBOL-Devs
SBOL Devs repository, a place to plan the software development that SBOL needs.
1
SynBioDex/Xperimental-Data-Connector
XDC uses excel2flapjack and excel2sbol and interlinks the data
Language:Python1 0 52
SynBioDex/Xperimental-Data-Connector-Server
This runs a submission to flapjack and synbiohub from an excel file
Language:HTML0 0 50
SynBioDex/.github
12 01
SynBioDex/activity-summaries
Language:HTML9 0
SynBioDex/Excel-to-Flapjack
Language:Jupyter Notebook3 61
SynBioDex/hugo-blox-builder
Hugo Academic - Theme
SynBioDex/SBOL-Notebooks
A repository containing Jupyter Notebooks for SBOL 3
Language:Jupyter Notebook10 0