manulera

manulera's Stars

• hovancik/stretchly

  The break time reminder app

  Language:JavaScript4.8k36780453

• biopython/biopython

  Official git repository for Biopython (originally converted from CVS)

  Language:Python4.5k1691.7k1.8k

• etetoolkit/ete

  Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

  Language:Python80435519215

• felixfbecker/dom-to-svg

  Library to convert a given HTML DOM node into an accessible SVG "screenshot".

  Language:TypeScript39185446

• ncbi/datasets

  NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.

  Language:Jupyter Notebook3802821245

• linkml/linkml

  Linked Open Data Modeling Language

  Language:Python333201.4k104

• hediet/browser-ext-github-monaco

  This extension brings the famous Monaco editor to Github

  Language:TypeScript26284336

• INCATools/ontology-access-kit

  Ontology Access Kit: A python library and command line application for working with ontologies

  Language:Python1291535229

• odwyersoftware/brunette

  🟤 A best practice Python code formatter

  Language:Python11271213

• mmcguffi/pLannotate

  Webserver and command line tool for annotating engineered plasmids

  Language:Python108113622

• OBOAcademy/obook

  OBO Organized Knowledge: Training materials for becoming an OBO engineer

  Language:Makefile1011517738

• Kludex/fastapi-responses

  Find HTTPExceptions and turn them into documented responses! :tada:

  Language:Python994911

• krassowski/easy-entrez

  Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.

  Language:Python734146

• tlambert03/FPbase

  The Fluorescent Protein Database

  Language:Python654165

• NBISweden/EMBLmyGFF3

  An efficient way to convert gff3 annotation files into EMBL format ready to submit.

  Language:Python59416815

• gbouras13/plassembler

  Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates

  Language:Python551193

• TeselaGen/tg-oss

  Teselagen Open Source modules

  Language:JavaScript48125421

• GenomicsStandardsConsortium/mixs

  Minimum Information about any (X) Sequence” (MIxS) specification

  Language:Python412073621

• hiyama341/teemi

  teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platform for workflow flexibility and automated tasks, accelerating metabolic engineering. Try teemi with our Google Colab notebooks!

  Language:Jupyter Notebook39243

• ponnhide/plasmidviewer

  Python library to visualize circular plasmid maps

  Language:Python22302

• manulera/ShareYourCloning

  A web application to generate molecular cloning strategies in json format, and share them with others.

  Language:Dockerfile184254

• pombase/curation

  PomBase curation

  763.7k0

• pombase/website

  PomBase website v2

  Language:TypeScript651.9k1

• davincios/tracer-cli

  Language:Rust4200

• baillon/eLabAPI

  Matlab package to facilitate working with ElabFTW API

  Language:HTML3100

• henrithomas/smithy-app

  Language:HTML3200

• CarolusVitalis/PUMA

  Promoter Unraveling through Machine-learning Algorithms

  Language:Jupyter Notebook2100

• pombase/canto_tutorial

  A static site with canto documentation for users to get started with Canto.

  Language:Python2510

• SergeDmi/CytosimPy-article

  2100

• SergeDmi/SergeDmi.github.io

  Personal pages

  Language:HTML1101