mmcguffi/pLannotate

Issues

• Databases not downloaded

  #44 opened 4 months ago by smy-commits
  0

• Docker container

  #43 opened 4 months ago by microbearlogist
  0

• adding custom database clarification

  #42 opened 8 months ago by mrland99
  6

• custom database installation

  #38 opened a year ago by c-ruprecht
  0

• Installation Issues

  #41 opened 8 months ago by NathanNgu
  1

• `st.cache` is deprecated

  #39 opened a year ago by bcantarel
  3

• Combined Annotations from pLannotate running locally

  #37 opened a year ago by BjornFJohansson
  0

• AttributeError: module 'streamlit' has no attribute 'cli'

  #36 opened a year ago by Nicoautoxp
  2

• [Request] Add feature annotations in the .gbk map

  #35 opened a year ago by eggrandio
  2

• Plasmid name defaults to "plasmid"

  #31 opened a year ago by abs-yy
  2

• Conda/mamba installation appears to be broken

  #22 opened a year ago by tfenne
  7

• Issue with streamlit.cli from conda installation

  #32 opened a year ago by eggrandio
  4

• Input file size

  #30 opened 2 years ago by idolawoye
  2

• Annotating a large batch of plasmid reads

  #26 opened 2 years ago by nh13
  5

• Retaining ORFs?

  #28 opened 2 years ago by abs-yy
  2

• use my own annotation file

  #24 opened 2 years ago by lzhangUT
  7

• any() takes 1 positional argument but 2 were given error

  #23 opened 2 years ago by abs-yy
  6

• ModuleNotFoundError: No module named 'streamlit.cli'

  #17 opened 2 years ago by sciguy
  4

• manual install broken

  #21 opened 2 years ago by nickcolossal
  2

• AttributeError: module 'streamlit' has no attribute 'cli'

  #20 opened 2 years ago by mcrone
  1

• Entry size is too large -- must be 50000 bases or less

  #19 opened 2 years ago by Nirmal2310
  6

• Converting html map to image?

  #18 opened 2 years ago by NavjothM
  0

• Issue while running plannotate inside singularity container

  #15 opened 2 years ago by NavjothM
  14

• Instructions for adding custom database?

  #16 opened 2 years ago by dmsalsgh97
  0

• Custom databases

  #5 opened 3 years ago by mmcguffi
  1

• Entry size is too large -- must be 50000 bases or less.

  #14 opened 3 years ago by HJTsai
  15

• Let's get this on Bioconda!

  #12 opened 3 years ago by rpetit3
  23

• batch mode

  #2 opened 3 years ago by jurquiza
  8

• DIAMOND does not find all potential hits

  #6 opened 3 years ago by mmcguffi
  1

• Finding nested features

  #7 opened 3 years ago by mmcguffi
  1

• annotations start one base pair too late when reverse

  #9 opened 3 years ago by dr3y
  5

• Installation instructions a bit unclear

  #10 opened 3 years ago by veghp
  3

• Location of blast databases

  #8 opened 3 years ago by smb20200615
  1