marbl/metAMOS

Issues

• metamos install error

  #282 opened 4 years ago by Mewgia
  0

• metAMOS INSTALL.py error

  #281 opened 4 years ago by fangyuanchang
  3

• [REAPR pipeline] Error opening file for writing ... task_pipeline.pl line 112.

  #280 opened 4 years ago by Hrovatin
  1

• REAPR

  #254 opened 8 years ago by Dangoh
  8

• Assembly always runs out of memory

  #279 opened 6 years ago by kspeeriful
  0

• Install Phylosift Issue

  #278 opened 6 years ago by kspeeriful
  0

• AttributeError: 'module' object has no attribute 'cached_phymem'

  #241 opened 8 years ago
  8

• python INSTALL.py error

  #277 opened 7 years ago by bioinformaticspcj
  1

• Troubles with a Docker implementation of iMetAMOS

  #275 opened 7 years ago by aldembert
  2

• **ERROR** All input sequences were empty

  #276 opened 7 years ago by kvaldez
  4

• not recognizing changes to parameters

  #274 opened 7 years ago by eam12
  2

• Steps to skip

  #273 opened 7 years ago by aldembert
  0

• syntax error when execute python2 INSTALL.py core

  #271 opened 7 years ago by xpingli
  0

• Error when running run_pipeline_test.sh (FragGeneScan, exit code -11)

  #270 opened 7 years ago by jwestrob
  1

• How to configure the settings for different tools

  #269 opened 7 years ago by ChunfangZheng
  0

• Scaffold failed with return code -11

  #248 opened 8 years ago by KDSR
  5

• Failed at PREPROCESS with error code -6

  #268 opened 8 years ago by jingzhejiang
  2

• Deprecated dependencies

  #267 opened 8 years ago by geboro
  1

• RunPipeline: project dir does not exist!

  #266 opened 8 years ago by jingzhejiang
  1

• Some questions about the DB

  #265 opened 8 years ago by chen496
  0

• rm: cannot remove `~/all.seq.mates': No such file or directory

  #264 opened 8 years ago by chen496
  2

• RunPipeline fails because "project dir does not exist"

  #259 opened 8 years ago by KDSR
  1

• Some html reports are empty after running

  #262 opened 8 years ago by hyjeong
  1

• Run setup.py import error

  #261 opened 8 years ago by GLFR
  2

• Run test_phylosift.sh error

  #263 opened 8 years ago by chen496
  9

• During findorfs, the following command failed with return code -6

  #260 opened 8 years ago by jtallman1
  1

• Best Linux Machine for the Binary Installation

  #256 opened 8 years ago by Jackie789
  1

• RHEL 6.8 Install Issue.

  #253 opened 8 years ago by DownSouthSmartGuy
  1

• Installation issue

  #255 opened 8 years ago by SilasK
  1

• Paths are invalid for install

  #252 opened 8 years ago by ianmisner
  3

• Error during installation

  #245 opened 8 years ago by jerowe
  2

• Error During findorfs, the following command failed with return code 2:

  #250 opened 8 years ago by SabeenR
  7

• psutil source path error in INSTALL.py

  #251 opened 8 years ago by milw
  1

• Error while running the iMetAOS test_pipeline_test.sh

  #249 opened 8 years ago by SabeenR
  6

• Not Preprocessing for some reason

  #230 opened 8 years ago by Biomicrogen
  2

• segmentation fault

  #233 opened 8 years ago by sejmodha
  17

• I have some question about using metamos

  #234 opened 8 years ago by kds2923
  2

• unable to connect to host during metAmos installation

  #235 opened 8 years ago by assafwww
  2

• Adding diamond as classification tool - Annotate

  #237 opened 8 years ago by sejmodha
  2

• metAMOS failed with return code -9

  #239 opened 8 years ago by osnattirosh
  3

• error at the postprocess step

  #240 opened 8 years ago by duanjunhyq
  5

• IndexError: list index out of range when runPipeline executed

  #247 opened 8 years ago by peterdfields
  3

• Error using test_ima.sh

  #246 opened 8 years ago by noellenoyes
  3

• Warning: library 1 has no sequences

  #244 opened 9 years ago by kchambers58178
  0

• Scaffold step not using allocated number of threads

  #243 opened 9 years ago by aabood
  2

• During propagate MetAMOS failed with return code 134

  #242 opened 9 years ago by KseniaErshova
  6

• /soapdenovo.55.asm.contig' is not a readable non-empty FASTA file

  #238 opened 9 years ago by nortex
  1

• run_pipeline_test.sh gives error: ERROR: Sequence file FindORFS/in/soapdenovo.55.asm.contig does not exist

  #236 opened 9 years ago by nortex
  1

• PacBio data set error

  #232 opened 9 years ago by MLister1
  1

• IDBA-UD multiple libraries

  #231 opened 9 years ago by shaman-narayanasamy
  0