maxlcummins
Microbial genomicist at the University of Technology, Sydney
University of Technology, SydneySydney, Australia
Pinned Repositories
abricateR
abricate combinator
APEC-MGEN-2018
A repository providing data and scripts for a 2018 publication in Microbial Genomics
Bioinformatics
A repository aimed to orient the uninitiated!
chooklord
Scripts supporting antarctic lake manuscript in development
pipelord
A microbial genomic analysis pipeline used by the Djordjevic Lab
pipelord_old
A collection of Snakemake workflows used by the Djordjevic Genomics Lab
plasmidmapR
A package for the mass calculation and visualisation of reference plasmid coverage within whole genome sequence datasets
SG17-135
A repository containing scripts for the generation of figures within a publication on an XDR strain of Salmonella sourced from an Australian Gull
SGI1-REs
A Github repository containing supplementary methodology and materials for a manuscript
ST95
maxlcummins's Repositories
maxlcummins/APEC-MGEN-2018
A repository providing data and scripts for a 2018 publication in Microbial Genomics
maxlcummins/AVC96-Supplementary_data
A repository containing a genome assembly for a manuscript submission
maxlcummins/bioawk
BWK awk modified for biological data
maxlcummins/E_coli_customDB
A custom database of IS elements and AMR- and virulence-associated gene sequences
maxlcummins/Shuvlord
These lords were made for shuvvin, 'n' that's just what they'll do!