Pinned Repositories
AWS-iGenomes-build
Building script for AWS-iGenomes
CAW-References
References files for CAW
compile-latex
Simple beamer/latex compiler using Nextflow, provided with Docker container
conferenceCoverage
Twitter Conference Coverage analysis from hastag using R-project
maxulysse.github.io
My own jekyll personnal website >>>
my_memes
my own memes
myCV
my CV made with compile-latex
nf-core_sarek
Main repo:
nf-references
Presentations
My presentations made with compile-latex
maxulysse's Repositories
maxulysse/myCV
my CV made with compile-latex
maxulysse/compile-latex
Simple beamer/latex compiler using Nextflow, provided with Docker container
maxulysse/my_memes
my own memes
maxulysse/maxulysse.github.io
My own jekyll personnal website >>>
maxulysse/nf-references
maxulysse/jsalignon_cactus
Chromatin ACcessibility and Transcriptomics Uniting Software
maxulysse/Mastodon-Bioinformatics
Most simple webapp to bulk follow bioinformatics accounts on Mastodon.
maxulysse/multi-package-containers
Testing building mulled containers for multi-requirement tools.
maxulysse/my_setup
Own guide to set up new computer
maxulysse/my_zsh
maxulysse/natir_variantplaner
A tool kit to manage many variant on desktop computer
maxulysse/nextflow-workflow-catalog
A statically generated catalog of available Nextflow workflows
maxulysse/nextflow_3500
maxulysse/nf-core_ampliseq
Amplicon sequencing analysis workflow using DADA2 and QIIME2
maxulysse/nf-core_atacseq
ATAC-seq peak-calling, QC and differential analysis pipeline
maxulysse/nf-core_chipseq
main repo: https://github.com/nf-core/chipseq
maxulysse/nf-core_crisprseq
A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).
maxulysse/nf-core_hic
Analysis of Chromosome Conformation Capture data (Hi-C)
maxulysse/nf-core_imcyto
main repo: https://github.com/nf-core/imcyto
maxulysse/nf-core_mag
main repo: https://github.com/nf-core/mag
maxulysse/nf-core_molkart
original repo: https://github.com/nf-core/molkart
maxulysse/nf-core_smrnaseq
A small-RNA sequencing analysis pipeline
maxulysse/nf-core_taxprofiler
Highly parallelised multi-taxonomic profiling of shotgun and long-read metagenomic data
maxulysse/nf-core_variantbenchmarking
A nextflow benchmark pipeline - premature
maxulysse/nf-test_109
maxulysse/nf-test_66
maxulysse/nf-training-intro
maxulysse/nf-wrap_main
Main repo
maxulysse/object_object_error
maxulysse/summit-website