mbhall88
Postdoc @ University of Melbourne with @lachlancoin. Bioinformatics | Nanopore | Microbial Genomics | Software Dev.
University of Melbourne | Doherty InstituteSunshine Coast, Australia
mbhall88's Stars
microsoft/pyright
Static Type Checker for Python
lz4/lz4
Extremely Fast Compression algorithm
serde-rs/serde
Serialization framework for Rust
rustls/rustls
A modern TLS library in Rust
red-data-tools/YouPlot
A command line tool that draw plots on the terminal.
sezanzeb/input-remapper
🎮 ⌨ An easy to use tool to change the behaviour of your input devices.
skerkour/black-hat-rust
Applied offensive security with Rust - https://kerkour.com/black-hat-rust
jqnatividad/qsv
Blazing-fast Data-Wrangling toolkit
ouch-org/ouch
Painless compression and decompression in the terminal
algesten/ureq
A simple, safe HTTP client
proptest-rs/proptest
Hypothesis-like property testing for Rust
rustedpy/result
NOT MAINTAINED - A simple Rust like Result type for Python 3. Fully type annotated.
console-rs/console
A rust console and terminal abstraction
ytdl-org/ytdl-nightly
Nightly builds for youtube-dl.
kcleal/gw
Genome browser and variant annotation
aineniamh/snipit
snipit: summarise snps relative to your reference sequence
shenwei356/LexicMap
LexicMap: efficient sequence alignment against millions of prokaryotic genomes
tbenavi1/genomescope2.0
Reference-free profiling of polyploid genomes
lh3/ropebwt3
BWT construction and search
Boshen/cargo-shear
Detect and remove unused dependencies from Cargo.toml
jguhlin/minimap2-rs
Rust bindings to minimap2 library
brentp/vcfexpress
expressions on VCFs
magiclen/Byte-Unit
A library for interaction with units of bytes.
stjude-rust-labs/sprocket
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
microbial-pangenomes-lab/microGWAS
Bacterial GWAS analysis
stjude-rust-labs/crankshaft
A Rust-based, headless workflow execution engine supporting local, cloud, and HPC.
oxli-bio/oxli
k-mers and the like
Portable-Network-Archive/liblzma-rs
Bindings to liblzma in Rust (xz streams in Rust)
apcamargo/seq-hasher
Compute hash digests for DNA sequences in a FASTA file
bluenote-1577/dbghaplo
Long-read haplotyping of small sequences with SNP-encoded de Bruijn graphs