mdibl/package_downloads

Issues

• Install missing packages on the cloud

  #60 opened 6 years ago by LucyHut
  0

• Install python Packages

  #56 opened 6 years ago by LucyHut
  0

• Toil Install failed

  #49 opened 6 years ago by LucyHut
  0

• Salmon 0.11.* Install failed

  #57 opened 6 years ago by LucyHut
  2

• Toil 3.17.0 Install Failed

  #59 opened 6 years ago by LucyHut
  1

• Install HTSeq

  #54 opened 6 years ago by LucyHut
  0

• Configure GGR-cwl

  #52 opened 6 years ago by LucyHut
  1

• Install python3 on the cloud

  #53 opened 6 years ago by LucyHut
  0

• Install cwltool

  #50 opened 6 years ago by LucyHut
  0

• Install GGR-cwl

  #51 opened 6 years ago by LucyHut
  0

• Install R packages

  #55 opened 6 years ago by LucyHut
  0

• Samtools 1.8 and 1.9 executable throwing error

  #58 opened 6 years ago by LucyHut
  1

• Create Priority List

  #44 opened 7 years ago by LucyHut
  2

• Create setToolVersion script

  #48 opened 7 years ago by LucyHut
  1

• Create a non git package downloader

  #39 opened 7 years ago by LucyHut
  1

• Created a release checker

  #36 opened 7 years ago by LucyHut
  2

• Create a git repos Exporter

  #38 opened 7 years ago by LucyHut
  2

• Refactor the dependency config of each tool

  #41 opened 7 years ago by LucyHut
  1

• Create a package Manager

  #37 opened 7 years ago by LucyHut
  2

• Refactor the config file of each tool

  #43 opened 7 years ago by LucyHut
  1

• Create a script for binary installs

  #46 opened 7 years ago by LucyHut
  1

• Standardize the download directory name tracking for non-git downloads

  #45 opened 7 years ago by LucyHut
  2

• Refactor the Install script of each tool

  #40 opened 7 years ago by LucyHut
  1

• Install Trimmomatic

  #31 opened 7 years ago by LucyHut
  3

• Install Picard Tools

  #47 opened 7 years ago by LucyHut
  1

• Refactoring this package

  #34 opened 7 years ago by LucyHut
  4

• Rename package_downloads

  #42 opened 7 years ago by LucyHut
  0

• Rename dependency config

  #35 opened 7 years ago by LucyHut
  1

• Install Trimgalore

  #30 opened 7 years ago by LucyHut
  1

• Install cutadapt

  #32 opened 7 years ago by LucyHut
  1

• Install libgtextutils

  #33 opened 7 years ago by LucyHut
  1

• Install Fastx_toolkit

  #29 opened 7 years ago by LucyHut
  1

• Install fastqc

  #28 opened 7 years ago by LucyHut
  1

• Bamtools v2.4.2 install failed

  #17 opened 7 years ago by LucyHut
  1

• Install Json C++

  #27 opened 7 years ago by LucyHut
  0

• Salmon - Download-and-Install-Package incorrectly failed the install

  #23 opened 7 years ago by LucyHut
  2

• Bedtools config: RELEASE_DIR not set properly

  #26 opened 7 years ago by LucyHut
  1

• Bowtie - beta tag installed

  #25 opened 7 years ago by LucyHut
  1

• Bowtie2 - alpha tag installed

  #24 opened 7 years ago by LucyHut
  1

• Download-and-Install-Package incorrectly failed Blat Install

  #22 opened 7 years ago by LucyHut
  1

• ToggleDownloads script failed for Bedtools

  #21 opened 7 years ago by LucyHut
  1

• Create an automation to keep track of installed Software Packages

  #20 opened 7 years ago by LucyHut
  0

• Automate stringtie package install

  #18 opened 7 years ago by LucyHut
  2

• Create an automation to keep track of installed R packages

  #19 opened 7 years ago by LucyHut
  1

• Automate Salmon package install

  #15 opened 7 years ago by LucyHut
  1

• Automate Toil package install

  #13 opened 7 years ago by LucyHut
  0

• Automate Kallisto package install

  #14 opened 7 years ago by LucyHut
  1

• Install Install Bioconductor Packages

  #16 opened 7 years ago by LucyHut
  0

• Automate Htslib Libraries Install

  #11 opened 7 years ago by LucyHut
  0

• Automate Jenkins Updates

  #12 opened 7 years ago by LucyHut
  0