merenlab/illumina-utils

Issues

• default number of cores

  #31 opened 3 years ago by EricDeveaud
  2

• issue with demultiplexing example

  #30 opened 3 years ago by dnolin13
  1

• iu-trim-fastq not working

  #29 opened 4 years ago by FlorianTrigodet
  3

• Failed quality curve generation

  #28 opened 4 years ago by satkinson0115
  2

• iu-subsample-fastq not recognizing paired ends

  #27 opened 4 years ago by luuuuuuuke
  12

• Installation with pip-20.1 failed

  #26 opened 5 years ago by DennisJakob
  2

• how to demultiplex unknown casava version fastq file ?

  #23 opened 5 years ago by mariabernard
  2

• not compatible with python 3.6

  #22 opened 5 years ago by dieunelderilus
  1

• Suggested changes to iu-remove-ids-from-fastq

  #21 opened 5 years ago by ShaiberAlon
  0

• using iu-remove-ids-from-fastq to remove read ids obtained from a bam file

  #19 opened 6 years ago by ShaiberAlon
  1

• iu-demultiplex creating errors

  #18 opened 7 years ago by ETaSky
  0

• Help interpreting iu-filter-quality-minoche crash

  #17 opened 7 years ago by jarrodscott
  12

• fastaunique

  #14 opened 7 years ago by annaship
  10

• Issue with config file for quality filtering

  #13 opened 7 years ago by vnsriniv
  6

• Python3 compatibility - iu-merge-pairs

  #8 opened 8 years ago by daniclaar
  2

• SequenceSource compressed for fasta

  #6 opened 8 years ago by annaship
  2

• Python 3 compatible

  #5 opened 8 years ago by dridk
  1

• --ignore-deflines flag is incompatible with --compute-qual-dicts flag.

  #4 opened 9 years ago by meren
  0

• iu-merge-pairs error

  #3 opened 9 years ago by nikolay12
  3

• Merging ITS amplicons

  #1 opened 11 years ago by meren
  0