Pinned Repositories
30DayMapChallenge
🌍 My contributions to the #30DayMapChallenge 2019
AACCUniv2019_IntroR
Course materials for 2019 AACC University session: Getting Started with R for Laboratory Medicine
Adjutant
Runs a pubmed query, returns results and allows user to explore high-level structure of returned documents
Age-associated_cancer_genome
aging-phenome
aRt
Generative or data-driven artwork made with R
art-from-code
aRtist
Making art with R
hdp
R pkg for Hierarchical Dirichlet Process
metabdel's Repositories
metabdel/AACCUniv2019_IntroR
Course materials for 2019 AACC University session: Getting Started with R for Laboratory Medicine
metabdel/aging-phenome
metabdel/BiodiversityLiterature
Evolution of interdisciplinarity in biodiversity science
metabdel/blood_rnaseq_rare_disease_paper
metabdel/CF_Epigenetics
R code repository for statistical analysis and data visualization of manuscript "Genome-wide DNA methylation profiling shows a distinct epigenetic signature associated with Lung Macrophages in cystic fibrosis"
metabdel/Cytoscape_workflows
collection of notebooks with different cytoscape workflows
metabdel/data_retrieval
Scripts for automated data retrieval from ArrayExpress, GEO and SRA
metabdel/DEG_Overlap_Analysis_System
Database and Analytic Functions for comparing transcriptomic variation between experiments
metabdel/Disease_PERCEPTION
All the scripts and files needed to get the disease, patient-subgroup and patient networks.
metabdel/exposome
The Blood Exposome Database
metabdel/FastSL
A MATLAB toolbox to rapidly evaluate synthetic lethal sets in organisms using the genome-scale metabolic models
metabdel/GenomicsDB
GenomicsDB
metabdel/GREIN
GREIN : GEO RNA-seq Experiments Interactive Navigator
metabdel/loinc2hpoAnnotation
loinc2hpo Annotation Data
metabdel/metakb
central repository for the VICC metakb web application
metabdel/ML_for_Hackers
Code accompanying the book "Machine Learning for Hackers"
metabdel/MSACL-intermediate-R-course
Course content for MSACL Data Science 201: Going Further with R
metabdel/myrepo-
testing my setup
metabdel/neurosynth-data
metabdel/octad_desktop
metabdel/ogrants
Open grants list
metabdel/packages-report
metabdel/Pax6_Newborn_DEG_Comp
metabdel/Pipeline-for-Design-of-Patient-Specific-Disease-Progression-Phenotypes
metabdel/raukr
Jenny Bryan's instruction at RaukR: Advanced R for Bioinformatics Summer School
metabdel/rna2essential
rna expression to essential genes
metabdel/Suppl-data-BBpaper
The Supplementary data in the paper "A Survey and Systematic Assessment of Computational Methods for Drug Response Prediction"
metabdel/tidytuesday
metabdel/transplantbenefit
Edinburgh liver app including transplant benefit score calculator
metabdel/VARPP