metagenopolis/meteor

Issues

• Mapped read count and overall mapping rate

  #57 opened 2 months ago by fthirion89
  0

• Sample name with dot

  #56 opened 2 months ago by fthirion89
  0

• misformatted KEGG annotation file for hs_2_9_skin

  #55 opened 3 months ago by fplazaonate
  1

• Meteor should create symlinks with relative, not absolute paths

  #54 opened 4 months ago by fplazaonate
  0

• Add import-fastqdir

  #7 opened 10 months ago by aghozlane
  1

• Separate mapping and count

  #32 opened 7 months ago by aghozlane
  0

• Pytest fail on python3.12

  #6 opened 7 months ago by aghozlane
  1

• Automatic tune counting parameters for normal/fast mode

  #46 opened 7 months ago by fplazaonate
  1

• Add functional output

  #48 opened 7 months ago by fthirion89
  1

• Use tigrfam and eggnog annotation for gbm computations

  #49 opened 7 months ago by fthirion89
  1

• Remove .git folder from references

  #47 opened 7 months ago by fplazaonate
  1

• Remove aghozlane/meteor from conda

  #45 opened 8 months ago by fplazaonate
  1

• meteor test should cover the strain analysis too

  #2 opened 8 months ago by aghozlane
  1

• Add meteor in bioconda

  #11 opened 8 months ago by aghozlane
  1

• Keep mgp_info in json

  #42 opened 9 months ago by aghozlane
  0

• Generate a biom file in meteor merge

  #9 opened 10 months ago by aghozlane
  1

• Obtain the pypi domain for meteor !

  #10 opened 9 months ago by aghozlane
  0

• Report meteor version in the json files

  #21 opened 9 months ago by aghozlane
  0

• Docker version is not working on mac

  #16 opened 9 months ago by aghozlane
  0

• Easy workflow

  #31 opened 9 months ago by aghozlane
  0

• Ete3 brings too many dependencies

  #14 opened 10 months ago by aghozlane
  1

• Create an output in the type of mpa

  #17 opened 10 months ago by aghozlane
  0

• Add meteor on pypi

  #15 opened 10 months ago by aghozlane
  1

• Writing Sam file generate a huge bandwidth traffic, we need to use cram

  #13 opened 10 months ago by aghozlane
  0

• Meteor Strain should provide more information in the logging.info

  #8 opened 10 months ago by aghozlane
  0

• Exit should return properly 1 when failed

  #12 opened 10 months ago by aghozlane
  0

• Report in one unique place in the code, the version of meteor

  #3 opened 10 months ago by aghozlane
  1

• Activate github actions

  #4 opened 10 months ago by aghozlane
  0

• Fix file detection in profile

  #5 opened 10 months ago by aghozlane
  0

• issue installing meteor from conda

  #1 opened 10 months ago by eugenibc
  2