meyer-lab/DDMC

PSSM calculation by Seq Score

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mcreixell commented

Shouldn't we generate the cluster PSSMs according to the sequence scores (self.seq_scores_) and not the weighted scores (self.scores_)? @aarmey

https://github.com/meyer-lab/resistance-MS/blob/6dffcf974224575058ad85573b3d3cb950215a9e/msresist/clustering.py#L122-L127

mcreixell commented

Oh no because we care about the final probabilities. Never mind I'm closing this.