drug-resistance
There are 23 repositories under drug-resistance topic.
jodyphelan/TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
PacificBiosciences/minorseq
Minor Variant Calling and Phasing Tools
gambalab/DREEP
Drug Response Estimation from single-cell Expression Profiles
mbhall88/head_to_head_pipeline
Snakemake pipelines to run the analysis for the Illumina vs. Nanopore comparison.
ojcharles/MutationFeatures
Generate a rich feature space describing all possible mutations in a given protein sequence (+ structure)
safinaARK/MTB-VCF
Multipurpose tool for targeted variant calling of genetic polymorphisms in Mycobacterium Tuberculosis
kehauser/Predicting-resistance-of-clinical-Abl-mutations-to-targeted-kinase-inhibitors-using-FEP
Data and analysis scripts used in Predicting resistance of clinical Abl mutations to targeted kinase inhibitors using alchemical free-energy calculations
MPB-mrcg/Pfalciparum_Mali_geo_temp_popgen
This study assessed the spatial genetic variation in P. falciparum populations in Mali
AmirHoseinSafari/M.tuberculosis-dataset-for-drug-resistant
The SNP and gene datasets of M. Tuberculosis for drug resistance prediction.
giffordlabcvr/HBV-GLUE
A GLUE project for hepatitis B virus (HBV).
giffordlabcvr/HCV-GLUE
A GLUE project for Hepatitis C virus (HCV)
meyer-lab/DDMC
Clusters phosphoproteomics data based on a combination of the sequence information and abundance changes over conditions.
russelllab/kinaseResistance
A method to predict activating, deactivating and resistance mutations in kinases
ukalwa/worms-on-paper
Flexible and disposable paper and plastic-based gel micropads for nematode handling, imaging and chemical testing
vvrahul11/SIMS-Cancer-Drug-Recommendation-System
Personalised scoring system for lung cancer patients that enables ranking of the activated interventional nodes.
zhangle0127/Global-Fund-Zhejiang-MDR-TB
Examine treatment outcomes, and predict the incidence of Tuberculosis
aarmey/resistance-modeling
The modeling code used for Manole et al, Canc Res, 2016.
CDDEP-DC/Malaria_Vaccine-Averted_Burden
Compartmental model projecting cases, resistant cases, and deaths averted in Africa from 2021-2030 with a vaccine similar to RTS,S.
hyunsoo77/BC_tamoxifen_response
This repository is for ER+ breast cancer scRNA-seq data processing and figure generation.
giffordlabcvr/HBV-GLUE-WEB
Web application for HBV-GLUE
giffordlabcvr/PHE-HCV-DRUG-RESISTANCE
HCV drug resistance extension based on collaboration with PHE.
sairamkrish/drug-release-analysis
Drug release analysis based on different statistical metrics