microbiome/OMA

Issues

• Improve examples

  #614 opened 12 days ago by TuomasBorman
  3

• IntegratedLearner

  #608 opened 17 days ago by antagomir
  0

• Multi-omic chapters to support TreeSE/MAE containers

  #607 opened 19 days ago by antagomir
  1

• Hardcoded row selection in Multi-omics Integration chapter

  #498 opened 19 days ago by artur-sannikov
  3

• New reverse dependencies

  #604 opened 19 days ago by antagomir
  0

• iSEEtree, miaSim

  #579 opened 2 months ago by TuomasBorman
  9

• Standardize styles for package names, functions and object types

  #469 opened a month ago by ake123
  3

• Styling of packages and functions

  #564 opened a month ago by TuomasBorman
  4

• Overlapping content

  #431 opened a month ago by antagomir
  3

• MGnify

  #523 opened a month ago by antagomir
  0

• gtools missing in DESCRIPTION

  #578 opened a month ago by artur-sannikov
  0

• Integrate new multiomic chapters in the book view

  #437 opened 5 months ago by antagomir
  2

• QMP example data

  #470 opened 4 months ago by antagomir
  2

• Ordination methods, interpretation

  #511 opened 3 months ago by TuomasBorman
  3

• tidyomics

  #521 opened 3 months ago by antagomir
  1

• Title of book

  #572 opened 2 months ago by TuomasBorman
  2

• Combine all languages into one workflow page

  #580 opened 2 months ago by RiboRings
  2

• New citation

  #522 opened 2 months ago by antagomir
  1

• Rename cross-correlation analysis to cross-association analysis

  #517 opened 2 months ago by artur-sannikov
  4

• Adding an interactive table to OMA?

  #515 opened 3 months ago by jkc9886
  5

• DA chapter

  #503 opened 2 months ago by antagomir
  4

• Mediation analysis example

  #475 opened 4 months ago by antagomir
  7

• Load all packages at the beginning of the chapter

  #467 opened 2 months ago by ake123
  6

• Citation for DAA paper

  #476 opened 2 months ago by TuomasBorman
  4

• library(mia) or library("mia")

  #563 opened 2 months ago by TuomasBorman
  2

• pseudocount

  #566 opened 2 months ago by TuomasBorman
  4

• pseudocount

  #510 opened 2 months ago by TuomasBorman
  1

• Link fixing

  #479 opened 2 months ago by ake123
  3

• taxpasta

  #551 opened 2 months ago by antagomir
  2

• Update the use of deprecated functions

  #519 opened 2 months ago by Insaynoah
  2

• addAlpha- update

  #559 opened 2 months ago by Daenarys8
  0

• RDA exercise update

  #565 opened 2 months ago by TuomasBorman
  1

• Update parameter names

  #526 opened 2 months ago by TuomasBorman
  0

• Provide different installation guidelines based on level of analysis

  #548 opened 2 months ago by RiboRings
  1

• automated method that keeps updating the oma_packages csv file

  #456 opened 2 months ago by ake123
  0

• Edge lines not getting connected node-to-node

  #540 opened 3 months ago by Lucifer1814
  1

• Fixes to book

  #482 opened 4 months ago by TuomasBorman
  10

• Fix build

  #529 opened 3 months ago by TuomasBorman
  4

• Correcting link for datasets

  #468 opened 3 months ago by ake123
  1

• ERROR: dependencies ‘SpiecEasi’, ‘SPRING’ are not available for package ‘NetCoMi’

  #525 opened 3 months ago by RiboRings
  2

• Duplicated `visualize-shannon` chunk

  #488 opened 4 months ago by artur-sannikov
  1

• Update Multi-omics chapter to use SE/TSE framework

  #477 opened 4 months ago by Daenarys8
  0

• update MGnifyR link

  #471 opened 4 months ago by antagomir
  0

• Chapter 12 duplicated in TOC

  #460 opened 5 months ago by antagomir
  0

• microeco examples?

  #466 opened 5 months ago by antagomir
  0

• Cheatsheet

  #449 opened 5 months ago by antagomir
  6

• Broken citation in Chapter 11

  #425 opened 5 months ago by artur-sannikov
  3

• qiime2R listing

  #427 opened 5 months ago by antagomir
  1

• DESCRIPTION

  #420 opened 5 months ago by antagomir
  3

• BiocBook rendering

  #406 opened 5 months ago by antagomir
  1